Balaji S. Srinivasan, Ph.D.

Institution:
Stanford University, Palo Alto, CA
Area:
bacterial genetic regulation
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"Balaji Srinivasan"
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Harley H. McAdams grad student 2006 Stanford
 (Protein interaction networks: Integration, analysis, and alignment.)
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Publications

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Ragta LK, Srinivasan B, Sinha SS. (2017) Efficient simulation of multidimensional continuum and non-continuum flows by a parallelised unified gas kinetic scheme solver International Journal of Computational Fluid Dynamics. 31: 292-309
Gora KG, Tsokos CG, Chen YE, et al. (2010) A cell-type-specific protein-protein interaction modulates transcriptional activity of a master regulator in caulobacter crescentus Molecular Cell. 39: 455-467
Flannick J, Novak A, Do CB, et al. (2009) Automatic parameter learning for multiple local network alignment. Journal of Computational Biology : a Journal of Computational Molecular Cell Biology. 16: 1001-22
Srinivasan BS, Chen J, Cheng C, et al. (2009) Methods for analysis in pharmacogenomics: lessons from the Pharmacogenetics Research Network Analysis Group. Pharmacogenomics. 10: 243-51
Boutte CC, Srinivasan BS, Flannick JA, et al. (2008) Genetic and computational identification of a conserved bacterial metabolic module. Plos Genetics. 4: e1000310
Srinivasan BS, Shah NH, Flannick JA, et al. (2007) Current progress in network research: toward reference networks for key model organisms. Briefings in Bioinformatics. 8: 318-32
May G, Srinivasan B, Jameson A. (2007) An improved gas-kinetic BGK finite-volume method for three-dimensional transonic flow Journal of Computational Physics. 220: 856-878
Flannick J, Novak A, Srinivasan BS, et al. (2006) Graemlin: general and robust alignment of multiple large interaction networks. Genome Research. 16: 1169-81
Srinivasan BS, Novak AF, Flannick JA, et al. (2006) Integrated protein interaction networks for 11 microbes Lecture Notes in Computer Science (Including Subseries Lecture Notes in Artificial Intelligence and Lecture Notes in Bioinformatics). 3909: 1-14
McAdams HH, Srinivasan B, Arkin AP. (2004) The evolution of genetic regulatory systems in bacteria. Nature Reviews. Genetics. 5: 169-78
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