Antonio L. Gomes, Ph.D.
Affiliations: | 2013 | Bioinformatics GRS | Boston University, Boston, MA, United States |
Area:
Bioinformatics Biology, Microbiology Biology, General BiologyGoogle:
"Antonio Gomes"Parents
Sign in to add mentor| James Galagan | grad student | 2013 | Boston University | |
| (Computational approaches to deciphering regulatory circuits in Mycobacterium tuberculosis from chip-seq data, and developing theoretical strategies to combat drug-resistant infections.) | ||||
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Publications
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| Yim SS, Johns NI, Park J, et al. (2019) Multiplex transcriptional characterizations across diverse bacterial species using cell-free systems. Molecular Systems Biology. 15: e8875 |
| Gomes AL, Wang HH. (2016) The Role of Genome Accessibility in Transcription Factor Binding in Bacteria. Plos Computational Biology. 12: e1004891 |
| Sharp JD, Singh AK, Park ST, et al. (2016) Comprehensive Definition of the SigH Regulon of Mycobacterium tuberculosis Reveals Transcriptional Control of Diverse Stress Responses. Plos One. 11: e0152145 |
| Knapp GS, Lyubetskaya A, Peterson MW, et al. (2015) Role of intragenic binding of cAMP responsive protein (CRP) in regulation of the succinate dehydrogenase genes Rv0249c-Rv0247c in TB complex mycobacteria. Nucleic Acids Research. 43: 5377-93 |
| Jaini S, Lyubetskaya A, Gomes A, et al. (2014) Transcription Factor Binding Site Mapping Using ChIP-Seq. Microbiology Spectrum. 2 |
| Gomes AL, Abeel T, Peterson M, et al. (2014) Decoding ChIP-seq with a double-binding signal refines binding peaks to single-nucleotides and predicts cooperative interaction. Genome Research. 24: 1686-97 |
| Gomes AL, Galagan JE, Segrè D. (2013) Resource competition may lead to effective treatment of antibiotic resistant infections. Plos One. 8: e80775 |
| Galagan JE, Minch K, Peterson M, et al. (2013) The Mycobacterium tuberculosis regulatory network and hypoxia. Nature. 499: 178-83 |
| Galagan J, Lyubetskaya A, Gomes A. (2013) ChIP-Seq and the complexity of bacterial transcriptional regulation. Current Topics in Microbiology and Immunology. 363: 43-68 |