Anne E. Carpenter
Affiliations: | The Broad Institute |
Area:
ImagingWebsite:
http://www.broadinstitute.org/~anne/Google:
"Anne Carpenter"Parents
Sign in to add mentor| Andrew Belmont | grad student | 1997-2003 | UIUC | |
| (Effects of transcriptional activators on large-scale chromatin structure.) | ||||
| David M. Sabatini | post-doc | Whitehead Institute for Biomedical Research (MIT) | ||
Children
Sign in to add trainee| Beth A Cimini | post-doc | Broad Institute | |
| Björn Nillson | post-doc | 2008- | The Broad Institute |
| Juan Carlos Caicedo Rueda | post-doc | 2016- | |
| Minh Doan | post-doc | 2016- | |
| Tim Becker | post-doc | 2017- | |
| Hamdah Shafqat Abbasi | post-doc | 2018- | |
| Imtiaz Khan | post-doc | 2010-2012 | The Broad Institute |
| Tammy Riklin-Raviv | post-doc | 2010-2012 | The Broad Institute |
| AJ (Hannes) Pretorius | post-doc | 2010-2013 | The Broad Institute |
| Shantanu Singh | post-doc | 2011-2014 | The Broad Institute |
| Holger Hennig | post-doc | 2013-2014 | The Broad Institute |
| Kyle Karhohs | post-doc | 2016-2018 | |
| Gregory P Way | post-doc | 2018-2021 | (Computational Biology Tree) |
| David J. Logan | research scientist | (Neurotree) | |
| Allen Goodman | research scientist | 2015- | |
| Beth E Cimini | research scientist | 2016- | |
| Mark-Anthony Peter Bray | research scientist | 2008-2016 | Broad Institute |
| Erin (Currie) Weisbart | research scientist | 2019-2021 | Broad Institute of Harvard and MIT |
BETA: Related publications
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Publications
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| Serrano E, Chandrasekaran SN, Bunten D, et al. (2025) Reproducible image-based profiling with Pycytominer. Nature Methods |
| Ewald JD, Titterton KL, Bäuerle A, et al. (2025) Cell Painting for cytotoxicity and mode-of-action analysis in primary human hepatocytes. Biorxiv : the Preprint Server For Biology |
| Ramezani M, Weisbart E, Bauman J, et al. (2025) A genome-wide atlas of human cell morphology. Nature Methods |
| Navidi Z, Ma J, Miglietta EA, et al. (2024) MorphoDiff: Cellular Morphology Painting with Diffusion Models. Biorxiv : the Preprint Server For Biology |
| Seal S, Trapotsi MA, Spjuth O, et al. (2024) Author Correction: Cell Painting: a decade of discovery and innovation in cellular imaging. Nature Methods |
| Seal S, Trapotsi MA, Spjuth O, et al. (2024) Cell Painting: a decade of discovery and innovation in cellular imaging. Nature Methods |
| Tegtmeyer M, Liyanage D, Han Y, et al. (2024) Combining NeuroPainting with transcriptomics reveals cell-type-specific morphological and molecular signatures of the 22q11.2 deletion. Biorxiv : the Preprint Server For Biology |
| van Dijk R, Arevalo J, Babadi M, et al. (2024) Capturing cell heterogeneity in representations of cell populations for image-based profiling using contrastive learning. Plos Computational Biology. 20: e1012547 |
| Lacoste J, Haghighi M, Haider S, et al. (2024) Pervasive mislocalization of pathogenic coding variants underlying human disorders. Cell |
| Garcia-Fossa F, Moraes-Lacerda T, Rodrigues-da-Silva M, et al. (2024) Live Cell Painting: image-based profiling in live cells using Acridine Orange. Biorxiv : the Preprint Server For Biology |