Curtis Huttenhower, Ph.D.
Affiliations: | 2009 | Princeton University, Princeton, NJ |
Area:
Bioinformatics Biology, Computer ScienceGoogle:
"Curtis Huttenhower"Parents
Sign in to add mentorOlga G. Troyanskaya | grad student | 2009 | Princeton | |
(Analysis of large genomic data collections.) |
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Publications
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Wang Y, Ma W, Mehta R, et al. (2023) Diet and gut microbial associations in irritable bowel syndrome according to disease subtype. Gut Microbes. 15: 2262130 |
Geistlinger L, Mirzayi C, Zohra F, et al. (2023) BugSigDB captures patterns of differential abundance across a broad range of host-associated microbial signatures. Nature Biotechnology |
Blanco-Míguez A, Beghini F, Cumbo F, et al. (2023) Extending and improving metagenomic taxonomic profiling with uncharacterized species using MetaPhlAn 4. Nature Biotechnology |
Kennedy KM, de Goffau MC, Perez-Muñoz ME, et al. (2023) Questioning the fetal microbiome illustrates pitfalls of low-biomass microbial studies. Nature. 613: 639-649 |
Mirzayi C, Renson A, et al. (2021) Reporting guidelines for human microbiome research: the STORMS checklist. Nature Medicine |
Beghini F, McIver LJ, Blanco-Míguez A, et al. (2021) Integrating taxonomic, functional, and strain-level profiling of diverse microbial communities with bioBakery 3. Elife. 10 |
Asnicar F, Berry SE, Valdes AM, et al. (2021) Microbiome connections with host metabolism and habitual diet from 1,098 deeply phenotyped individuals. Nature Medicine |
Yan Y, Nguyen LH, Franzosa EA, et al. (2020) Strain-level epidemiology of microbial communities and the human microbiome. Genome Medicine. 12: 71 |
Karcher N, Pasolli E, Asnicar F, et al. (2020) Analysis of 1321 Eubacterium rectale genomes from metagenomes uncovers complex phylogeographic population structure and subspecies functional adaptations. Genome Biology. 21: 138 |
Asnicar F, Thomas AM, Beghini F, et al. (2020) Precise phylogenetic analysis of microbial isolates and genomes from metagenomes using PhyloPhlAn 3.0. Nature Communications. 11: 2500 |