Qiangfeng C. Zhang, Ph.D.
Affiliations: | Biochemistry and Molecular Biophysics | Columbia University, New York, NY |
Area:
computational biophysics and bioinformaticsGoogle:
"Qiangfeng Zhang"Mean distance: 8.77 | S | N | B | C | P |
Parents
Sign in to add mentor| Barry H. Honig | grad student | 2011 | Columbia | |
| (Towards the integration of structural and systems biology: Structure-based studies of protein-protein interactions on a genome-wide scale.) | ||||
| Howard Y. Chang | post-doc | 2012-2015 | Stanford | |
| Michael Snyder | post-doc | 2012-2015 | Stanford (Computational Biology Tree) | |
Children
Sign in to add trainee| Lei Sun | grad student | ||
| Yuzhe Li | grad student | 2019- | Tsinghua University |
BETA: Related publications
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Publications
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| Li Y, Zhang J, Gao X, et al. (2024) Tissue module discovery in single-cell-resolution spatial transcriptomics data via cell-cell interaction-aware cell embedding. Cell Systems |
| Yang R, Pan M, Guo J, et al. (2024) Mapping of the influenza A virus genome RNA structure and interactions reveals essential elements of viral replication. Cell Reports. 43: 113833 |
| Huang W, Xiong T, Zhao Y, et al. (2024) Computational prediction and experimental validation identify functionally conserved lncRNAs from zebrafish to human. Nature Genetics |
| Deng J, Fang X, Huang L, et al. (2023) RNA structure determination: From 2D to 3D. Fundamental Research. 3: 727-737 |
| Xiang Y, Huang W, Tan L, et al. (2023) Pervasive downstream RNA hairpins dynamically dictate start-codon selection. Nature |
| Deng P, Tan SQ, Yang QY, et al. (2023) Structural RNA components supervise the sequential DNA cleavage in R2 retrotransposon. Cell |
| Xu Y, Zhu J, Huang W, et al. (2023) PrismNet: predicting protein-RNA interaction using in vivo RNA structural information. Nucleic Acids Research |
| Zhao J, Chow EY, Yeung PY, et al. (2022) Enhanced transcriptome-wide RNA G-quadruplex sequencing for low RNA input samples with rG4-seq 2.0. Bmc Biology. 20: 257 |
| Xiong L, Tian K, Li Y, et al. (2022) Online single-cell data integration through projecting heterogeneous datasets into a common cell-embedding space. Nature Communications. 13: 6118 |
| Huang W, Zhang QC. (2022) Prediction of Dynamic RBP-RNA Interactions Using PrismNet. Methods in Molecular Biology (Clifton, N.J.). 2568: 123-132 |