Anton V. Sinitskiy, Ph.D.

Affiliations: 
2014 Chemistry University of Chicago, Chicago, IL 
Area:
theoretical and computer simulation studies of biomolecular and liquid state phenomena
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Gregory A. Voth grad student 2014 Chicago
 (Multiscale modeling of large biomolecular systems.)
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Publications

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Sinitskiy AV, Pande VS. (2018) Computer Simulations Predict High Structural Heterogeneity of Functional State of NMDA Receptors. Biophysical Journal
Sinitskiy AV, Pande VS. (2018) Theoretical restrictions on longest implicit time scales in Markov state models of biomolecular dynamics. The Journal of Chemical Physics. 148: 044111
Sinitskiy AV, Voth GA. (2018) Quantum mechanics/coarse-grained molecular mechanics (QM/CG-MM). The Journal of Chemical Physics. 148: 014102
Sinitskiy AV, Pande VS. (2017) Simulated Dynamics of Glycans on Ligand-Binding Domain of NMDA Receptors Reveals Strong Dynamic Coupling between Glycans and Protein Core. Journal of Chemical Theory and Computation
Sinitskiy AV, Stanley NH, Hackos DH, et al. (2017) Computationally Discovered Potentiating Role of Glycans on NMDA Receptors. Scientific Reports. 7: 44578
Madsen JJ, Sinitskiy AV, Li J, et al. (2017) Highly Coarse-grained Representations of Transmembrane Proteins. Journal of Chemical Theory and Computation
Hocky GM, Baker JL, Bradley MJ, et al. (2016) Cations Stiffen Actin Filaments by Adhering a Key Structural Element to Adjacent Subunits. The Journal of Physical Chemistry. B
Hocky GM, Baker JL, Bradley MJ, et al. (2016) Specific Cation Binding Stiffens Actin Filaments by Adhering D-Loops to Adjacent Monomers Biophysical Journal. 110: 125a
Sinitskiy AV, Voth GA. (2015) A reductionist perspective on quantum statistical mechanics: Coarse-graining of path integrals. The Journal of Chemical Physics. 143: 094104
Davtyan A, Dama JF, Sinitskiy AV, et al. (2014) The Theory of Ultra-Coarse-Graining. 2. Numerical Implementation. Journal of Chemical Theory and Computation. 10: 5265-75
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