Maryna Taranova, Ph.D.

Affiliations: 
2014 Chemistry University of California, Irvine, Irvine, CA 
Area:
Theoretical Chemistry and Biophysics
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"Maryna Taranova"
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Ioan Andricioaei grad student 2014 UC Irvine
 (Complex Molecular Assemblies with Stress-Induced DNA Studied via Multi-Scale Simulations.)
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Publications

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Taranova M, Hirsh AD, Perkins NC, et al. (2014) Role of microscopic flexibility in tightly curved DNA. The Journal of Physical Chemistry. B. 118: 11028-36
Lionberger TA, Vahia A, Hirsh AD, et al. (2014) Mechanical Strain Generated by RNA Polymerase during Transcription Initiation can Drive Structural Changes in DNA Topology that Relieve Repression Biophysical Journal. 106: 488a
Hirsh AD, Taranova M, Lionberger TA, et al. (2013) Structural ensemble and dynamics of toroidal-like DNA shapes in bacteriophage ϕ29 exit cavity. Biophysical Journal. 104: 2058-67
Hirsh AD, Lillian TD, Lionberger TA, et al. (2013) A model for highly strained DNA compressed inside a protein cavity Journal of Computational and Nonlinear Dynamics. 8
Taranova M, Lionberger TA, Hirsh AD, et al. (2013) Transcription on Tangled DNA Biophysical Journal. 104: 585a
Hirsh AD, Taranova M, Lillian TD, et al. (2012) The Structure and Function of Highly Bent Toroidal DNA in Bacteriophage φ29 Biophysical Journal. 102: 421a-422a
Taranova M, Lionberger TA, Hirsh AD, et al. (2012) Impact of Bending and Torsional Deformations of DNA on the Function of T7-RNA Polymerase Biophysical Journal. 102: 285a
Lillian TD, Taranova M, Wereszczynski J, et al. (2011) A multiscale dynamic model of DNA supercoil relaxation by topoisomerase IB. Biophysical Journal. 100: 2016-23
Hirsh AD, Taranova M, Lillian TD, et al. (2011) Investigating a Novel Toroid-Shaped DNA Structure Found in Mature Bacteriophage φ29 Biophysical Journal. 100: 401a
Lillian TD, Taranova M, Andricioaei I, et al. (2010) Simulating the Relaxation of DNA Supercoils By Topoisomerase I Biophysical Journal. 98: 74a
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