☰ Chemistry Tree

Arjan van der Vaart

Affiliations:	2006-2009	Chemistry	Arizona State University, Tempe, AZ, United States
	2009-	Chemistry	University of South Florida, Tampa, FL, United States

Area:

General Biophysics, Biochemistry

Website:

http://chemistry.usf.edu/faculty/vandervaart/

Google:

"Arjan van der Vaart"

Bio:

http://chemistry.usf.edu/faculty/data/CV-Arjan_van_der_Vaart.pdf

Mean distance: (not calculated yet)

Tree Publications Similar researchers PubMed Report error

Parents

Herman J.C. Berendsen	grad student	1995	RUG
(M.S.)
Kenneth M. Merz, Jr.	grad student	2001	Penn State
(A semiempirical study of biomolecular solvation.)
Martin Karplus	post-doc	2001-2005	Harvard

Children

Daniel A. Barr	grad student	2011	Arizona State
Justin M. Spiriti	grad student	2011	Arizona State

Collaborators

BETA: Related publications

Publications

You can help our author matching system! If you notice any publications incorrectly attributed to this author, please sign in and mark matches as correct or incorrect.
Orndorff PB, van der Vaart A. (2023) Register-Shifted Structures in Base-Flipped Uracil-Damaged DNA. Journal of the American Chemical Society. 145: 16350-16354
Orndorff PB, van der Vaart A. (2023) Systematic assessment of the flexibility of uracil damaged DNA. Journal of Biomolecular Structure & Dynamics. 1-11
Orndorff PB, Poddar S, Owens AM, et al. (2023) Uracil-DNA glycosylase efficiency is modulated by substrate rigidity. Scientific Reports. 13: 3915
Ma N, van der Vaart A. (2017) Free Energy Coupling between DNA Bending and Base Flipping. Journal of Chemical Information and Modeling. 57: 2020-2026
Ma N, van der Vaart A. (2017) [KCl] Dependence of B-DNA Groove Bending Anisotropy. The Journal of Physical Chemistry. B. 121: 5322-5330
Peguero-Tejada A, van der Vaart A. (2017) Biasing Simulations of DNA Base Pair Parameters with Application to Propellor Twisting in AT/AT, AA/TT, and AC/GT Steps and Their Uracil Analogs. Journal of Chemical Information and Modeling. 57: 85-92
Ma N, van der Vaart A. (2016) Anisotropy of B-DNA Groove Bending. Journal of the American Chemical Society. 138: 9951-8
Karolak A, van der Vaart A. (2016) Molecular Dynamics Simulations of 5-Hydroxycytosine Damaged DNA. The Journal of Physical Chemistry. B. 120: 42-8
Gray GM, van der Vaart A. (2015) Importance of β2-β3 Loop Motion for the Increased Binding and Decreased Selectivity of the ΔLL Mutant of the Human Papillomavirus Type 6 E2 Protein. Biochemistry. 54: 4918-26
van der Vaart A. (2015) Coupled binding-bending-folding: The complex conformational dynamics of protein-DNA binding studied by atomistic molecular dynamics simulations. Biochimica Et Biophysica Acta. 1850: 1091-8

See more...