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A J. Hopfinger

Affiliations: 
University of Illinois at Chicago, Health Sciences Center, Chicago, IL 60612, United States 
Area:
Pharmaceutical Chemistry, Pharmacology
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Yufeng J. Tseng grad student 2002 University of Illinois at Chicago, Health Sciences Center
Craig L. Senese grad student 2003 University of Illinois at Chicago, Health Sciences Center
Jianzhong Liu grad student 2004 University of Illinois at Chicago, Health Sciences Center
Dahua Pan grad student 2004 University of Illinois at Chicago, Health Sciences Center
Manisha Iyer grad student 2005 University of Illinois at Chicago, Health Sciences Center

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Publications

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Esposito EX, Hopfinger AJ, Shao CY, et al. (2015) Exploring possible mechanisms of action for the nanotoxicity and protein binding of decorated nanotubes: interpretation of physicochemical properties from optimal QSAR models. Toxicology and Applied Pharmacology. 288: 52-62
Esposito EX, Hopfinger AJ, Shao CY, et al. (2015) Exploring possible mechanisms of action for the nanotoxicity and protein binding of decorated nanotubes: Interpretation of physicochemical properties from optimal QSAR models Toxicology and Applied Pharmacology. 288: 52-62
Shao CY, Chen SZ, Su BH, et al. (2013) Dependence of QSAR models on the selection of trial descriptor sets: a demonstration using nanotoxicity endpoints of decorated nanotubes. Journal of Chemical Information and Modeling. 53: 142-58
da Rocha Pita SS, Albuquerque MG, Rodrigues CR, et al. (2012) Receptor-dependent 4D-QSAR analysis of peptidemimetic inhibitors of Trypanosoma cruzi trypanothione reductase with receptor-based alignment. Chemical Biology & Drug Design. 79: 740-8
Tseng YJ, Hopfinger AJ, Esposito EX. (2012) The great descriptor melting pot: mixing descriptors for the common good of QSAR models. Journal of Computer-Aided Molecular Design. 26: 39-43
Shen MY, Su BH, Esposito EX, et al. (2011) A comprehensive support vector machine binary hERG classification model based on extensive but biased end point hERG data sets. Chemical Research in Toxicology. 24: 934-49
Andrade CH, Pasqualoto KF, Ferreira EI, et al. (2010) 4D-QSAR: perspectives in drug design. Molecules (Basel, Switzerland). 15: 3281-94
Su BH, Shen MY, Esposito EX, et al. (2010) In silico binary classification QSAR models based on 4D-fingerprints and MOE descriptors for prediction of hERG blockage. Journal of Chemical Information and Modeling. 50: 1304-18
Andrade CH, Pasqualoto KF, Ferreira EI, et al. (2010) 3D-Pharmacophore mapping of thymidine-based inhibitors of TMPK as potential antituberculosis agents. Journal of Computer-Aided Molecular Design. 24: 157-72
Thipnate P, Liu J, Hannongbua S, et al. (2009) 3D pharmacophore mapping using 4D QSAR analysis for the cytotoxicity of lamellarins against human hormone-dependent T47D breast cancer cells. Journal of Chemical Information and Modeling. 49: 2312-22
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