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Philip C. Bevilacqua

Affiliations: 
Chemistry Pennsylvania State University, State College, PA, United States 
Area:
RNA Folding and Catalysis
Website:
http://www.chem.psu.edu/directory/pcb5
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"Philip C. Bevilacqua"
Bio:

http://www.bio.pku.edu.cn/Exchange/inter-school/download/Philip_C_Bevilacqua/CV.pdf

Mean distance: 8.05
 
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Parents

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Douglas H. Turner grad student 1993 Rochester
 (Dynamics of substrate-ribozyme interaction : binding, conformational changes, and catalysis)
Thomas R. Cech post-doc 1993-1997 CU Boulder

Children

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Erica Frankel grad student Penn State
Janell E. Schaak grad student 2003 Penn State
Ellen M. Moody grad student 2004 Penn State
Trevor S. Brown grad student 2005 Penn State
Rieko Yajima grad student 2006 Penn State
Adam P. McGraw grad student 2008 Penn State
Andrea L. Szakal grad student 2008 Penn State
Joshua M. Blose grad student 2009 Penn State
Nathan A. Siegfried grad student 2009 Penn State
Laurie A. Heinicke grad student 2010 Penn State
Rebecca Toroney grad student 2010 Penn State
Melissa A. Mullen grad student 2011 Penn State
Joshua E. Sokoloski grad student 2011 Penn State
Chun Kit Kwok grad student 2009-2014 Penn State
Sunita Patel post-doc 2010-2011 Penn State
Joshua Alan Boyer post-doc 2009-2013 Penn State
Yiliang Ding post-doc 2010-2013 Penn State University, University Park (Plant Biology Tree)
Raghav R. Poudyal post-doc 2016-2020 Penn State

Collaborators

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Melek Nihan Ucisik collaborator 2015- Penn State
BETA: Related publications

Publications

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McKinley LN, Bevilacqua PC. (2024) CHiTA: A scarless high-throughput pipeline for characterization of ribozymes. Methods (San Diego, Calif.). 234: 120-130
McKinley LN, Meyer MO, Sebastian A, et al. (2024) Direct testing of natural twister ribozymes from over a thousand organisms reveals a broad tolerance for structural imperfections. Nucleic Acids Research
McKinley LN, Meyer MO, Sebastian A, et al. (2024) Direct testing of natural twister ribozymes from over a thousand organisms reveals a broad tolerance for structural imperfections. Biorxiv : the Preprint Server For Biology
Douds CA, Babitzke P, Bevilacqua P. (2024) A new reagent for in vivo structure probing of RNA G and U residues that improves RNA structure prediction alone and combined with DMS. Rna (New York, N.Y.)
Jolley EA, Bevilacqua PC. (2024) Single-cell probing of RNA structure. Nature Methods
McKinley LN, Kern RG, Assmann SM, et al. (2023) Flanking Sequence Cotranscriptionally Regulates Twister Ribozyme Activity. Biochemistry. 63: 53-68
Meyer MO, Choi S, Keating CD, et al. (2023) Structure-seq of tRNAs and other short RNAs in droplets and in vivo. Methods in Enzymology. 691: 81-126
Sieg JP, Jolley EA, Huot MJ, et al. (2023) In vivo-like nearest neighbor parameters improve prediction of fractional RNA base-pairing in cells. Nucleic Acids Research
Meyer MO, Yamagami R, Choi S, et al. (2023) RNA folding studies inside peptide-rich droplets reveal roles of modified nucleosides at the origin of life. Science Advances. 9: eadh5152
Williams AM, Jolley E, Santiago-Martínez MG, et al. (2023) structure probing of RNA in Archaea: Novel insights into the ribosome structure of . Rna (New York, N.Y.)
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