Robert P. Zinzen, Ph.D.

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Legnini I, Emmenegger L, Zappulo A, et al. (2023) Spatiotemporal, optogenetic control of gene expression in organoids. Nature Methods. 20: 1544-1552
McCorkindale AL, Wahle P, Werner S, et al. (2019) A gene expression atlas of embryonic neurogenesis in reveals complex spatiotemporal regulation of lncRNAs. Development (Cambridge, England). 146
Menzel P, McCorkindale AL, Stefanov SR, et al. (2018) Transcriptional dynamics of microRNAs and their targets during Drosophila neurogenesis. Rna Biology
Ibrahim MM, Karabacak A, Glahs A, et al. (2018) Determinants of promoter and enhancer transcription directionality in metazoans. Nature Communications. 9: 4472
Hafez D, Karabacak A, Krueger S, et al. (2017) McEnhancer: predicting gene expression via semi-supervised assignment of enhancers to target genes. Genome Biology. 18: 199
Karaiskos N, Wahle P, Alles J, et al. (2017) The Drosophila embryo at single-cell transcriptome resolution. Science (New York, N.Y.)
Alles J, Karaiskos N, Praktiknjo SD, et al. (2017) Cell fixation and preservation for droplet-based single-cell transcriptomics. Bmc Biology. 15: 44
Glahs A, Zinzen RP. (2016) Putting chromatin in its place: the pioneer factor NeuroD1 modulates chromatin state to drive cell fate decisions. The Embo Journal. 35: 1-3
Rembold M, Ciglar L, YÃ¡Ã±ez-Cuna JO, et al. (2014) A conserved role for Snail as a potentiator of active transcription. Genes & Development. 28: 167-81
Bonn S, Zinzen RP, Perez-Gonzalez A, et al. (2012) Cell type-specific chromatin immunoprecipitation from multicellular complex samples using BiTS-ChIP. Nature Protocols. 7: 978-94