Jerome Y. Baudry, Ph.D.
Affiliations: | 2008-2017 | The University of Tennessee, Knoxville, TN, United States | |
| 2017- | Biological Sciences | The University of Alabama in Huntsville, Huntsville, AL, United States |
Area:
Drug discovery, supercomputing, virtual screening, molecular modeling, molecular dynamics, computational chemistryWebsite:
https://www.uah.edu/science/departments/biology/faculty-staff/jerome-baudryGoogle:
"https://scholar.google.com/citations?user=yGqMp3sAAAAJ&hl=en"Mean distance: 39813
Parents
Sign in to add mentor| Jeremy C. Smith | grad student | 1994-1998 | University of Tennessee, Knoxville |
| Klaus Schulten | post-doc | 1998-2000 | UIUC |
Children
Sign in to add trainee| Sally R. Ellingson | grad student | 2010-2014 | University of Kentucky |
| Jason B. Harris | grad student | 2010-2014 | CDD Vault, Burlingame, CA |
| Karan Kapoor | grad student | 2010-2015 | UIUC |
| Wilfredo Falcon Evangelista | grad student | 2014-2017 | The University of Lima, Peru |
BETA: Related publications
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Publications
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| Agarwal R, Pattarawat P, Duff MR, et al. (2024) Structure-Based Identification of Novel Histone Deacetylase 4 (HDAC4) Inhibitors. Pharmaceuticals (Basel, Switzerland). 17 |
| Bensing BA, Stubbs HE, Agarwal R, et al. (2022) Origins of glycan selectivity in streptococcal Siglec-like adhesins suggest mechanisms of receptor adaptation. Nature Communications. 13: 2753 |
| Sripriya Akondi V, Menon V, Baudry J, et al. (2022) Novel Big Data-Driven Machine Learning Models for Drug Discovery Application. Molecules (Basel, Switzerland). 27 |
| Baudry J, Bondar AN, Cournia Z, et al. (2021) Editorial: Advances in computational molecular biophysics. Biochimica Et Biophysica Acta. General Subjects. 129888 |
| Spencer JA, Penfound T, Salehi S, et al. (2021) Cross-reactive immunogenicity of group A streptococcal vaccines designed using a recurrent neural network to identify conserved M protein linear epitopes. Vaccine |
| Kapoor K, Pi M, Nishimoto SK, et al. (2020) The carboxylation status of osteocalcin has important consequences for its structure and dynamics. Biochimica Et Biophysica Acta. General Subjects. 129809 |
| Agarwal R, Bensing BA, Mi D, et al. (2020) Structure based virtual screening identifies small molecule effectors for the sialoglycan binding protein Hsa. The Biochemical Journal |
| Aranha MP, Penfound TA, Spencer JA, et al. (2020) Structure-based group A streptococcal vaccine design: Helical wheel homology predicts antibody cross-reactivity among streptococcal M protein-derived peptides. The Journal of Biological Chemistry |
| Hu X, Smith MD, Humphreys BM, et al. (2019) Ligand-Dependent Sodium Ion Dynamics within the A-Adenosine Receptor: A Molecular Dynamics Study. The Journal of Physical Chemistry. B |
| Evangelista W, Ellingson SR, Smith JC, et al. (2019) Ensemble Docking in Drug Discovery: How Many Protein Configurations from Molecular Dynamics Simulations Are Needed to Reproduce Known Ligand Binding? The Journal of Physical Chemistry. B |