Serdar Durdagi

Affiliations: 
Bahcesehir University, School of Medicine, Department of Biophysics 
Area:
computer-aided drug design, virtual screening, molecular docking, MD simulations, protein engineering, computational modeling, protein-protein and protein-ligand interactions
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"Serdar Durdagi"
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Publications

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Haddad S, Oktay L, Erol I, et al. (2023) Utilizing Heteroatom Types and Numbers from Extensive Ligand Libraries to Develop Novel hERG Blocker QSAR Models Using Machine Learning-Based Classifiers. Acs Omega. 8: 40864-40877
Aksoydan B, Durdagi S. (2022) Virtual drug repurposing study for the CGRPR identifies pentagastrin and leuprorelin as putative candidates. Journal of Molecular Graphics & Modelling. 116: 108254
DurdaĞi S. (2020) Virtual drug repurposing study against SARS-CoV-2 TMPRSS2 target. Turkish Journal of Biology = Turk Biyoloji Dergisi. 44: 185-191
Turan RD, Albayrak E, Uslu M, et al. (2020) Development of Small Molecule MEIS Inhibitors that modulate HSC activity. Scientific Reports. 10: 7994
Sahin K, Durdagi S. (2020) Identifying new piperazine-based PARP1 inhibitors using text mining and integrated molecular modeling approaches. Journal of Biomolecular Structure & Dynamics. 1-10
Gunay BC, Yurtsever M, Durdagi S. (2019) Elucidation of interaction mechanism of hERG1 potassium channel with scorpion toxins BeKm-1 and BmTx3b. Journal of Molecular Graphics & Modelling. 96: 107504
Ikram S, Ahmad J, Durdagi S. (2019) Screening of FDA approved drugs for finding potential inhibitors against Granzyme B as a potent drug-repurposing target. Journal of Molecular Graphics & Modelling. 107462
Sahin K, Zengin Kurt B, Sonmez F, et al. (2019) Novel AChE and BChE Inhibitors Using Combined Virtual Screening, Text mining and In Vitro Binding Assays. Journal of Biomolecular Structure & Dynamics. 1-24
Erol I, Aksoydan B, Kantarcioglu I, et al. (2018) Application of Multiscale Simulation Tools on GPCRs. An Example with Angiotensin II Type 1 Receptor. Methods in Molecular Biology (Clifton, N.J.). 1824: 431-448
Aksoydan B, Kantarcioglu I, Erol I, et al. (2018) Structure-based design of hERG-neutral antihypertensive oxazalone and imidazolone derivatives. Journal of Molecular Graphics & Modelling. 79: 103-117
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