Håkan Viklund, Ph.D.
Affiliations: | Biochemistry and Biophysics | Stockholm University, Stockholm, Stockholms län, Sweden |
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| Bernsel A, Viklund H, Hennerdal A, et al. (2009) TOPCONS: consensus prediction of membrane protein topology. Nucleic Acids Research. 37: W465-8 |
| Viklund H, Bernsel A, Skwark M, et al. (2008) SPOCTOPUS: a combined predictor of signal peptides and membrane protein topology. Bioinformatics (Oxford, England). 24: 2928-9 |
| Bernsel A, Viklund H, Falk J, et al. (2008) Prediction of membrane-protein topology from first principles. Proceedings of the National Academy of Sciences of the United States of America. 105: 7177-81 |
| Viklund H, Elofsson A. (2008) OCTOPUS: improving topology prediction by two-track ANN-based preference scores and an extended topological grammar. Bioinformatics (Oxford, England). 24: 1662-8 |
| Papaloukas C, Granseth E, Viklund H, et al. (2008) Estimating the length of transmembrane helices using Z-coordinate predictions. Protein Science : a Publication of the Protein Society. 17: 271-8 |
| Bernsel A, Viklund H, Elofsson A. (2008) Remote homology detection of integral membrane proteins using conserved sequence features. Proteins. 71: 1387-99 |
| Granseth E, Viklund H, Elofsson A. (2006) ZPRED: predicting the distance to the membrane center for residues in alpha-helical membrane proteins. Bioinformatics (Oxford, England). 22: e191-6 |
| Viklund H, Granseth E, Elofsson A. (2006) Structural classification and prediction of reentrant regions in alpha-helical transmembrane proteins: application to complete genomes. Journal of Molecular Biology. 361: 591-603 |
| Amico M, Finelli M, Rossi I, et al. (2006) PONGO: a web server for multiple predictions of all-alpha transmembrane proteins. Nucleic Acids Research. 34: W169-72 |
| Viklund H, Elofsson A. (2004) Best alpha-helical transmembrane protein topology predictions are achieved using hidden Markov models and evolutionary information. Protein Science : a Publication of the Protein Society. 13: 1908-17 |