Shankai Yan, Ph.D.
Affiliations: | 2015-2018 | Computer Science | City University of Hong Kong, Kowloon, Hong Kong |
Area:
Computational Biology, Biomedical Text Mining, Bioinformatics, Machine LearningWebsite:
http://skyan.meGoogle:
"Shankai Yan"Bio:
Shankai received his Ph.D. degree in Department of Computer Science at City University of Hong Kong (4th in QS World University Ranking aged under 50 and 5th in Times University Ranking aged under 50) under the supervision of Dr. WONG Ka-Chun. After that, he was awarded the fellowship of NIH and worked as a Postdoctoral Fellow in Zhiyong Lu’s BioNLP Lab at NCBI/NLM/NIH. He is now an associate professor in School of Computer Science and Technology at Hainan University. He has published papers with interesting topics on top conference and journals (e.g. ACL(BioNLP), AMIA, Bioinformatics, FGCS, JBI and JBHI), demonstrating his solid research skills. His research is mainly about applied machine learning in biomedical and clinical fields. His goal is to facilitate knowledge discovery and decision making in healthcare research communities using AI technology.
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Publications
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| Liu Z, Wong HM, Chen X, et al. (2023) MotifHub: Detection of trans-acting DNA motif group with probabilistic modeling algorithm. Computers in Biology and Medicine. 168: 107753 |
| Chen Q, Lee K, Yan S, et al. (2020) BioConceptVec: Creating and evaluating literature-based biomedical concept embeddings on a large scale. Plos Computational Biology. 16: e1007617 |
| Yan S, Wong KC. (2019) Context awareness and embedding for biomedical event extraction. Bioinformatics (Oxford, England) |
| Wong KC, Chen J, Zhang J, et al. (2019) Early Cancer Detection from Multianalyte Blood Test Results. Iscience. 15: 332-341 |
| Yan S, Wong KC. (2019) GESgnExt: Gene Expression Signature Extraction and Meta-analysis on Gene Expression Omnibus. Ieee Journal of Biomedical and Health Informatics |
| Wong K, Zhang J, Yan S, et al. (2019) DNA Sequencing Technologies Acm Computing Surveys. 52: 1-30 |
| Wong KC, Yan S, Lin Q, et al. (2018) Deleterious Non-Synonymous Single Nucleotide Polymorphism Predictions on Human Transcription Factors. Ieee/Acm Transactions On Computational Biology and Bioinformatics |
| Chen J, Yan S, Wong K. (2018) Verbal aggression detection on Twitter comments: convolutional neural network for short-text sentiment analysis Neural Computing and Applications. 32: 10809-10818 |
| Yan S, Wong KC. (2017) Elucidating high-dimensional cancer hallmark annotation via enriched ontology. Journal of Biomedical Informatics |
| Wong KC, Peng C, Yan S, et al. (2016) Probabilistic Inference on Multiple Normalized Genome-Wide Signal Profiles with Model Regularization. Ieee Transactions On Nanobioscience |