Yassene Mohammed
Affiliations: | 2011-2016 | Center for Proteomics and Metabolomics | Leiden University Medical Center, Leiden, Netherlands |
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Publications
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| Prakash A, Taylor L, Varkey M, et al. (2021) Reinspection of a Clinical Proteomics Tumor Analysis Consortium (CPTAC) Dataset with Cloud Computing Reveals Abundant Post-Translational Modifications and Protein Sequence Variants. Cancers. 13 |
| Bhowmick P, Roome S, Borchers CH, et al. (2021) An Update on MRMAssayDB: A Comprehensive Resource for Targeted Proteomics Assays in the Community. Journal of Proteome Research |
| Mohammed Y, Palmblad M. (2020) Using the Object-Oriented PowerShell for Simple Proteomics Data Analysis. Methods in Molecular Biology (Clifton, N.J.). 2051: 389-405 |
| Mohammed Y, Palmblad M. (2018) Visualization and application of amino acid retention coefficients obtained from modeling of peptide retention. Journal of Separation Science |
| Mohammed Y, van Vlijmen BJ, Yang J, et al. (2017) Multiplexed targeted proteomic assay to assess coagulation factor concentrations and thrombosis-associated cancer. Blood Advances. 1: 1080-1087 |
| Mohammed Y, Palmblad M. (2016) Visualizing and comparing results of different peptide identification methods. Briefings in Bioinformatics |
| Percy AJ, Yang J, Chambers AG, et al. (2016) Protocol for Standardizing High-to-Moderate Abundance Protein Biomarker Assessments Through an MRM-with-Standard-Peptides Quantitative Approach. Advances in Experimental Medicine and Biology. 919: 515-530 |
| Guler AT, Waaijer CJF, Mohammed Y, et al. (2016) Automating bibliometric analyses using Taverna scientific workflows: A tutorial on integrating Web Services Journal of Informetrics. 10: 830-841 |
| Holl S, Mohammed Y, Zimmermann O, et al. (2015) Scientific workflow optimization for improved peptide and protein identification. Bmc Bioinformatics. 16: 284 |
| Mohammed Y, Borchers CH. (2015) An extensive library of surrogate peptides for all human proteins. Journal of Proteomics. 129: 93-7 |