Ali Khamene, Ph.D. - Publications

Affiliations: 
2000 University of Miami, Coral Gables, FL 
Area:
Computer Science, Electronics and Electrical Engineering

44 high-probability publications. We are testing a new system for linking publications to authors. You can help! If you notice any inaccuracies, please sign in and mark papers as correct or incorrect matches. If you identify any major omissions or other inaccuracies in the publication list, please let us know.

Year Citation  Score
2010 Zikic D, Glocker B, Kutter O, Groher M, Komodakis N, Khamene A, Paragios N, Navab N. Markov random field optimization for intensity-based 2D-3D registration Progress in Biomedical Optics and Imaging - Proceedings of Spie. 7623. DOI: 10.1117/12.837232  0.359
2009 Sundar H, Khamene A, Yatziv L, Xu C. Automatic image-based cardiac and respiratory cycle synchronization and gating of image sequences. Medical Image Computing and Computer-Assisted Intervention : Miccai ... International Conference On Medical Image Computing and Computer-Assisted Intervention. 12: 381-8. PMID 20426135 DOI: 10.1007/978-3-642-04271-3_47  0.335
2009 Khamene A, Zikic D, Diallo M, Boettger T, Rietzel E. A novel intensity similarity metric with soft spatial constraint for a deformable image registration problem in radiation therapy. Medical Image Computing and Computer-Assisted Intervention : Miccai ... International Conference On Medical Image Computing and Computer-Assisted Intervention. 12: 828-36. PMID 20426065 DOI: 10.1007/978-3-642-04268-3_102  0.326
2009 Troyan SL, Kianzad V, Gibbs-Strauss SL, Gioux S, Matsui A, Oketokoun R, Ngo L, Khamene A, Azar F, Frangioni JV. The FLARE intraoperative near-infrared fluorescence imaging system: a first-in-human clinical trial in breast cancer sentinel lymph node mapping. Annals of Surgical Oncology. 16: 2943-52. PMID 19582506 DOI: 10.1245/S10434-009-0594-2  0.391
2009 Troyan S, Gibbs-Strauss S, Gioux S, Oketokoun R, Azar F, Khamene A, Kianzad V, Rosenberg M, Clough BL, Frangioni JV. Image-guided near-infrared fluorescent sentinel lymph node mapping in human breast cancer Journal of Clinical Oncology. 27. DOI: 10.1200/Jco.2009.27.15_Suppl.E11591  0.395
2009 Xu F, Khamene A, Fluck O. High performance tomosynthesis enabled via a GPU-based iterative reconstruction framework Progress in Biomedical Optics and Imaging - Proceedings of Spie. 7258. DOI: 10.1117/12.813773  0.324
2009 Groher M, Bender F, Khamene A, Wein W, Heibel TH, Navab N. 3D guide wire navigation from single plane fluoroscopic images in abdominal catheterizations Informatik Aktuell. 356-360.  0.306
2008 Bender F, Groher M, Khamene A, Wein W, Heibel TH, Navab N. 3D dynamic roadmapping for abdominal catheterizations. Medical Image Computing and Computer-Assisted Intervention : Miccai ... International Conference On Medical Image Computing and Computer-Assisted Intervention. 11: 668-75. PMID 18982662 DOI: 10.1007/978-3-540-85990-1-80  0.339
2008 Wein W, Brunke S, Khamene A, Callstrom MR, Navab N. Automatic CT-ultrasound registration for diagnostic imaging and image-guided intervention. Medical Image Analysis. 12: 577-85. PMID 18650121 DOI: 10.1016/J.Media.2008.06.006  0.396
2008 Tai A, Christensen J, Gore E, Khamene A, Boettger T, Li X. SU‐GG‐J‐191: Use of Megavoltage Fluoroscopy and Cone‐Beam CT for On‐Line Verification During 4D/gated Delivery Medical Physics. 35: 2723-2723. DOI: 10.1118/1.2961740  0.447
2008 Wein W, Khamene A. Image-based method for in-vivo freehand ultrasound calibration Progress in Biomedical Optics and Imaging - Proceedings of Spie. 6920. DOI: 10.1117/12.769948  0.367
2007 Azar FS, Lee K, Khamene A, Choe R, Corlu A, Konecky SD, Sauer F, Yodh AG. Standardized platform for coregistration of nonconcurrent diffuse optical and magnetic resonance breast images obtained in different geometries. Journal of Biomedical Optics. 12: 051902. PMID 17994885 DOI: 10.1117/1.2798630  0.374
2007 Christensen J, Tai A, Chen G, Boettger T, Khamene A, Celi J, Li X. MO‐E‐M100F‐04: Optimizing Low‐Dose Megavoltage Fluoroscopy for 4D Radiotherapy Medical Physics. 34: 2528-2529. DOI: 10.1118/1.2761270  0.408
2007 Tai A, Christensen J, Khamene A, Bayouth J, Boettger T, Celi J, Li X. SU-FF-J-28: A Software Tool for On-Line Real-Time Verification of Gated Delivery Using Megavoltage Fluoroscopy Medical Physics. 34: 2374-2374. DOI: 10.1118/1.2760533  0.45
2007 Sielhorst T, Sa W, Khamene A, Sauer F, Navab N. Measurement of absolute latency for video see through augmented reality 2007 6th Ieee and Acm International Symposium On Mixed and Augmented Reality, Ismar. DOI: 10.1109/ISMAR.2007.4538850  0.323
2006 Zikic D, Wein W, Khamene A, Clevert DA, Navab N. Fast deformable registration of 3D-ultrasound data using a variational approach. Medical Image Computing and Computer-Assisted Intervention : Miccai ... International Conference On Medical Image Computing and Computer-Assisted Intervention. 9: 915-23. PMID 17354978  0.309
2006 Wacker FK, Vogt S, Khamene A, Jesberger JA, Nour SG, Elgort DR, Sauer F, Duerk JL, Lewin JS. An augmented reality system for MR image-guided needle biopsy: initial results in a swine model. Radiology. 238: 497-504. PMID 16436814 DOI: 10.1148/Radiol.2382041441  0.351
2006 Khamene A, Bloch P, Wein W, Svatos M, Sauer F. Automatic registration of portal images and volumetric CT for patient positioning in radiation therapy. Medical Image Analysis. 10: 96-112. PMID 16150629 DOI: 10.1016/J.Media.2005.06.002  0.4
2006 Li X, Khamene A, Tai A, Khater K, Celi J, Hristov D, Ofstad B. SU‐FF‐J‐48: Developing In‐Line KV Fluoroscopic Verification for 4D Adaptive Radiotherapy Medical Physics. 33: 2031-2031. DOI: 10.1118/1.2240826  0.477
2006 Kassaee A, Bloch P, Khamene A, Stripp D. SU‐FF‐J‐30: Automatic Determination of Required Adjustment in Patient Setup for Radiation Therapy Medical Physics. 33: 2026-2027. DOI: 10.1118/1.2240808  0.43
2006 Sundar H, Khamene A, Xu C, Sauer F, Davatzikos C. A novel 2D-3D registration algorithm for aligning fluoro images with 3D pre-op CT/MR images Progress in Biomedical Optics and Imaging - Proceedings of Spie. 6141. DOI: 10.1117/12.654251  0.324
2006 Azar FS, Hajjioui N, Khamene A, Grady L, Lee K, Choe R, Corlu A, Konecky SD, Yodh AG, Sauer F. A software platform for visualization & multimodal registration of diffuse optical tomography and MRI of breast cancer Proceedings of Spie - the International Society For Optical Engineering. 6081. DOI: 10.1117/12.649516  0.392
2006 Negahdaripour S, Barufaldi C, Khamene A. Integrated system for robust 6-DOF positioning utilizing new closed-form visual motion estimation methods in planar terrains Ieee Journal of Oceanic Engineering. 31: 533-550. DOI: 10.1109/Joe.2005.850914  0.622
2006 Vogt S, Khamene A, Sauer F. Reality augmentation for medical procedures: System architecture, single camera marker tracking, and system evaluation International Journal of Computer Vision. 70: 179-190. DOI: 10.1007/S11263-006-7938-1  0.376
2006 Liao R, Guetter C, Xu C, Sun Y, Khamene A, Sauer F. Learning-based 2D/3D rigid registration using Jensen-Shannon divergence for image-guided surgery Lecture Notes in Computer Science (Including Subseries Lecture Notes in Artificial Intelligence and Lecture Notes in Bioinformatics). 4091: 228-235.  0.318
2005 Azar FS, Elbawab M, Khamene A, Lee K, Choe R, Corlu A, Konecky SD, Yodh AG, Sauer F. Multimodal information integration & visualization: Optical imaging and MRI Proceedings of Spie - the International Society For Optical Engineering. 6009. DOI: 10.1117/12.638976  0.304
2005 Florin C, Williams J, Khamene A, Paragios N. Registration of 3D angiographic and X-ray images using sequential Monte Carlo sampling Lecture Notes in Computer Science (Including Subseries Lecture Notes in Artificial Intelligence and Lecture Notes in Bioinformatics). 3765: 427-436. DOI: 10.1007/11569541_43  0.339
2003 Wendt M, Sauer F, Khamene A, Bascle B, Vogt S, Wacker FK. A head-mounted display system for augmented reality: Initial evaluation for interventional MRI Rofo Fortschritte Auf Dem Gebiet Der Rontgenstrahlen Und Der Bildgebenden Verfahren. 175: 418-421. PMID 12635021 DOI: 10.1055/s-2003-37831  0.316
2003 Sauer F, Schoepf UJ, Khamene A, Vogt S, Das M, Silverman SG. Augmented reality system for CT-guided interventions: System description and initial phantom trials Proceedings of Spie - the International Society For Optical Engineering. 5029: 384-394. DOI: 10.1117/12.480383  0.308
2003 Khamene A, Negahdaripour S. Motion and structure from multiple cues; image motion, shading flow, and stereo disparity Computer Vision and Image Understanding. 90: 99-127. DOI: 10.1016/S1077-3142(03)00028-6  0.66
2002 Sauer F, Khamene A, Bascle B, Vogt S, Rubino GJ. Augmented reality visualization in iMRI operating room: System description and pre-clinical testing Proceedings of Spie - the International Society For Optical Engineering. 4681: 446-454. DOI: 10.1117/12.466949  0.322
2002 Navab N, Genc Y, Khamene A, Mitschke M. Direct method for motion estimation: An alternative to decomposition of planar transformation matrices Lecture Notes in Computer Science (Including Subseries Lecture Notes in Artificial Intelligence and Lecture Notes in Bioinformatics). 2449: 575-582.  0.311
2002 Negahdaripour S, Madjidi H, Khamene A. Stereovision imaging to map seafloor and benthic habitats Sea Technology. 43: 35-39.  0.571
2001 Sauer F, Khamene A, Bascle B, Rubino GJ. A head-mounted display system for augmented reality image guidance: Towards clinical evaluation for iMRI-guided neurosurgery Lecture Notes in Computer Science (Including Subseries Lecture Notes in Artificial Intelligence and Lecture Notes in Bioinformatics). 2208: 707-716. DOI: 10.1007/3-540-45468-3_85  0.342
2001 Khamene A, Madjidi H, Negahdaripour S. 3-D mapping of sea floor scenes by stereo imaging Oceans Conference Record (Ieee). 4: 2577-2581.  0.652
2000 Khamene A, Negahdaripour S. A new method for the extraction of fetal ECG from the composite abdominal signal. Ieee Transactions On Bio-Medical Engineering. 47: 507-16. PMID 10763296 DOI: 10.1109/10.828150  0.532
2000 Khamene A, Negahdaripour S, Tseng SC. A spectral-discrimination method for tear-film lipid-layer thickness estimation from fringe pattern images. Ieee Transactions On Bio-Medical Engineering. 47: 249-58. PMID 10721632 DOI: 10.1109/10.821773  0.593
2000 Negahdaripour S, Khamene A. Motion-based compression of underwater video imagery for the operations of unmanned submersible vehicles Computer Vision and Image Understanding. 79: 162-183. DOI: 10.1006/cviu.2000.0845  0.645
2000 Khamene A, Negahdaripour S, Tseng SCG. A spectraldiscrimination method for tearfilm lipidlayer thickness estimation from fringe pattern images Ieee Transactions On Biomedical Engineering. 47: 249258.  0.587
1999 Khamene A, Negahdaripour S. Building 3-D elevation maps of sea-floor scenes from underwater stereo images Oceans Conference Record (Ieee). 1: 64-70.  0.583
1998 Negahdaripour S, Xu X, Khamene A, Awan Z. 3-D motion and depth estimation from sea-floor images for mosaic-based station-keeping and navigation of ROVs/AUVs and high-resolution sea-floor mapping Proceedings of the Ieee Symposium On Autonomous Underwater Vehicle Technology. 191-200.  0.653
1998 Negahdaripour S, Zhang S, Xun X, Khamene A. On shape and motion recovery from underwater imagery for 3D mapping and motion-based video compression Oceans Conference Record (Ieee). 1: 277-281.  0.584
1998 Negahdaripour S, Xu X, Khamene A. Applications of direct 3D motion estimation for underwater machine vision systems Oceans Conference Record (Ieee). 1: 51-55.  0.63
1997 Khamene A, Negahdaripour S, Rosenbaum J, Tseng SCG. Topographical difference in prhcorneal l1p1d film stability revealed by dynamic analysis of color interference images Investigative Ophthalmology and Visual Science. 38.  0.568
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