Vadim Alexandrov, Ph.D.
Affiliations: | Yale University, New Haven, CT |
Area:
Computational Biology and BioinformaticsGoogle:
"Vadim Alexandrov"Parents
Sign in to add mentor| Mark B. Gerstein | grad student | 2004 | Yale | |
| (Three-dimensional hidden Markov models and normal mode analysis for modeling protein structure and motion in a statistical framework.) | ||||
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Publications
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| Alexandrov V, Lehnert U, Echols N, et al. (2005) Normal modes for predicting protein motions: a comprehensive database assessment and associated Web tool. Protein Science : a Publication of the Protein Society. 14: 633-43 |
| Alexandrov V, Gerstein M. (2004) Using 3D Hidden Markov Models that explicitly represent spatial coordinates to model and compare protein structures. Bmc Bioinformatics. 5: 2 |
| Krebs WG, Tsai J, Alexandrov V, et al. (2003) Tools and databases to analyze protein flexibility; approaches to mapping implied features onto sequences. Methods in Enzymology. 374: 544-84 |
| Krebs WG, Alexandrov V, Wilson CA, et al. (2002) Normal mode analysis of macromolecular motions in a database framework: developing mode concentration as a useful classifying statistic. Proteins. 48: 682-95 |
| Liu Y, Luscombe NM, Alexandrov V, et al. (2002) Structural genomics: a new era for pharmaceutical research. Genome Biology. 3: REPORTS4004 |
| Qian J, Stenger B, Wilson CA, et al. (2001) PartsList: a web-based system for dynamically ranking protein folds based on disparate attributes, including whole-genome expression and interaction information. Nucleic Acids Research. 29: 1750-64 |
| Alexandrov V, Gerstein M. (2001) Calculating populations of subcellular compartments using density matrix formalism International Journal of Quantum Chemistry. 85: 693-696 |