Parsa Hosseini, Ph.D.

Affiliations: 
2013 Bioinformatics and Computational Biology George Mason University, Washington, DC 
Area:
Bioinformatics
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"Parsa Hosseini"

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M Saleet Jafri grad student 2013 George Mason
 (Quantifying the Glycine max Proximal Cis-regulome during Pathogenesis.)
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Publications

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Hosseini P, Matthews BF. (2014) Regulatory interplay between soybean root and soybean cyst nematode during a resistant and susceptible reaction. Bmc Plant Biology. 14: 300
Tremblay A, Hosseini P, Li S, et al. (2013) Analysis of Phakopsora pachyrhizi transcript abundance in critical pathways at four time-points during infection of a susceptible soybean cultivar using deep sequencing. Bmc Genomics. 14: 614
Hosseini P, Ovcharenko I, Matthews BF. (2013) Using an ensemble of statistical metrics to quantify large sets of plant transcription factor binding sites. Plant Methods. 9: 12
Matthews BF, Beard H, MacDonald MH, et al. (2013) Engineered resistance and hypersusceptibility through functional metabolic studies of 100 genes in soybean to its major pathogen, the soybean cyst nematode. Planta. 237: 1337-57
Tremblay A, Hosseini P, Li S, et al. (2012) Identification of genes expressed by Phakopsora pachyrhizi, the pathogen causing soybean rust, at a late stage of infection of susceptible soybean leaves Plant Pathology. 61: 773-786
Matsye PD, Kumar R, Hosseini P, et al. (2011) Mapping cell fate decisions that occur during soybean defense responses. Plant Molecular Biology. 77: 513-28
Ibrahim HM, Hosseini P, Alkharouf NW, et al. (2011) Analysis of gene expression in soybean (Glycine max) roots in response to the root knot nematode Meloidogyne incognita using microarrays and KEGG pathways. Bmc Genomics. 12: 220
Klink VP, Hosseini P, Matsye PD, et al. (2011) Differences in gene expression amplitude overlie a conserved transcriptomic program occurring between the rapid and potent localized resistant reaction at the syncytium of the Glycine max genotype Peking (PI 548402) as compared to the prolonged and potent resistant reaction of PI 88788. Plant Molecular Biology. 75: 141-65
Tremblay A, Hosseini P, Alkharouf NW, et al. (2011) Gene Expression in Leaves of SusceptibleGlycine maxduring Infection withPhakopsora pachyrhiziUsing Next Generation Sequencing Sequencing. 2011: 1-14
Hosseini P, Tremblay A, Matthews BF, et al. (2010) An efficient annotation and gene-expression derivation tool for Illumina Solexa datasets. Bmc Research Notes. 3: 183
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