Gregor Rot

Affiliations: 
Faculty of Computer and Information Science University of Ljubljana, Ljubljana, Ljubljana, Slovenia 
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"Gregor Rot"
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Publications

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Bryce-Smith S, Burri D, Gazzara MR, et al. (2023) Extensible benchmarking of methods that identify and quantify polyadenylation sites from RNA-seq data. Rna (New York, N.Y.)
Bryce-Smith S, Burri D, Gazzara MR, et al. (2023) Extensible benchmarking of methods that identify and quantify polyadenylation sites from RNA-seq data. Biorxiv : the Preprint Server For Biology
Winstanley-Zarach P, Rot G, Kuba S, et al. (2023) Analysis of RNA Polyadenylation in Healthy and Osteoarthritic Human Articular Cartilage. International Journal of Molecular Sciences. 24
Spruce T, Plass M, Gohr A, et al. (2022) The X-linked splicing regulator MBNL3 has been co-opted to restrict placental growth in eutherians. Plos Biology. 20: e3001615
Modic M, Grosch M, Rot G, et al. (2019) Cross-Regulation between TDP-43 and Paraspeckles Promotes Pluripotency-Differentiation Transition. Molecular Cell
Rot G, Wang Z, Huppertz I, et al. (2017) High-Resolution RNA Maps Suggest Common Principles of Splicing and Polyadenylation Regulation by TDP-43. Cell Reports. 19: 1056-1067
Cereda M, Pozzoli U, Rot G, et al. (2014) RNAmotifs: prediction of multivalent RNA motifs that control alternative splicing. Genome Biology. 15: R20
Miranda ER, Rot G, Toplak M, et al. (2013) Transcriptional profiling of Dictyostelium with RNA sequencing. Methods in Molecular Biology (Clifton, N.J.). 983: 139-71
Wagnon JL, Briese M, Sun W, et al. (2012) CELF4 regulates translation and local abundance of a vast set of mRNAs, including genes associated with regulation of synaptic function. Plos Genetics. 8: e1003067
Rogelj B, Easton LE, Bogu GK, et al. (2012) Widespread binding of FUS along nascent RNA regulates alternative splicing in the brain. Scientific Reports. 2: 603
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