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Andrew I. Su, Ph.D.

Affiliations: 
Scripps Research Institute, La Jolla, La Jolla, CA, United States 
Area:
bioinformatics, genetics, genomics
Website:
http://sulab.org
Google:
"Andrew Su"
Cross-listing: Chemistry Tree

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Parents

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Brian K. Shoichet research assistant 1996-1998 Northwestern University Medical School (Chemistry Tree)
Peter G. Schultz grad student 1998-2002 Scripps Institute (Chemistry Tree)
 (Genomics technologies for functional gene annotation.)
John B. Hogenesch grad student 1999-2004 Genomics Institute of the Novartis Research Foundation (Neurotree)

Children

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Jacob Bruggemann grad student 2015- Scripps Institute
Tong S. Li grad student 2015- Scripps Institute
Michael Mayers grad student 2016- Scripps Institute (Chemistry Tree)
Ryan Thompson grad student 2016- Scripps Institute (Chemistry Tree)
Roger Tu grad student 2018- Scripps Institute
Erick R. Scott grad student 2014-2015 Scripps Institute
Jiwen Xin grad student 2015-2018 Scripps Institute
Louis Gioia grad student 2014-2019 Scripps Institute
Núria Queralt Rosinach post-doc 2016- Scripps Institute (Chemistry Tree)
Chunlei Wu post-doc 2005-2007 Genomics Institute of the Novartis Research Foundation
David L. Delano post-doc 2007-2008 Genomics Institute of the Novartis Research Foundation (Chemistry Tree)
Jennifer A. Floyd post-doc 2006-2009 Genomics Institute of the Novartis Research Foundation (Chemistry Tree)
Stephen V. Su post-doc 2007-2009 Genomics Institute of the Novartis Research Foundation (Chemistry Tree)
Yue Hu post-doc 2007-2010 Genomics Institute of the Novartis Research Foundation
Benjamin M. Good post-doc 2010-2013 Scripps Institute
Kathleen M. Fisch post-doc 2013-2014 Scripps Institute
Tobias Meißner post-doc 2013-2014 Scripps Institute
Salvatore Loguercio post-doc 2012-2015 Scripps Institute
Gregory S. Stupp post-doc 2014-2016 Scripps Institute
Ramya B. Gamini post-doc 2014-2017 Scripps Institute
Tim Putman post-doc 2015-2017 Scripps Institute
Sebastian Burgstaller-Muehlbacher post-doc 2015-2018 Scripps Institute

Collaborators

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John B. Hogenesch collaborator 2005- Scripps Institute (Neurotree)
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Publications

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Fecho K, Bizon C, Issabekova T, et al. (2023) An approach for collaborative development of a federated biomedical knowledge graph-based question-answering system: Question-of-the-Month challenges. Journal of Clinical and Translational Science. 7: e214
Gonzalez-Cavazos AC, Tanska A, Mayers M, et al. (2023) DrugMechDB: A Curated Database of Drug Mechanisms. Scientific Data. 10: 632
Callaghan J, Xu CH, Xin J, et al. (2023) BioThings Explorer: a query engine for a federated knowledge graph of biomedical APIs. Bioinformatics (Oxford, England)
Gonzalez-Cavazos AC, Tanska A, Mayers MD, et al. (2023) DrugMechDB: A Curated Database of Drug Mechanisms. Biorxiv : the Preprint Server For Biology
Callaghan J, Xu CH, Xin J, et al. (2023) BioThings Explorer: a query engine for a federated knowledge graph of biomedical APIs. Arxiv
Cano MA, Tsueng G, Zhou X, et al. (2023) Schema Playground: a tool for authoring, extending, and using metadata schemas to improve FAIRness of biomedical data. Bmc Bioinformatics. 24: 159
Gangavarapu K, Latif AA, Mullen JL, et al. (2023) Outbreak.info genomic reports: scalable and dynamic surveillance of SARS-CoV-2 variants and mutations. Nature Methods
Tsueng G, Mullen JL, Alkuzweny M, et al. (2023) Outbreak.info Research Library: a standardized, searchable platform to discover and explore COVID-19 resources. Nature Methods
Hughes LD, Tsueng G, DiGiovanna J, et al. (2023) Addressing barriers in FAIR data practices for biomedical data. Scientific Data. 10: 98
Tsueng G, Cano MAA, Bento J, et al. (2023) Developing a standardized but extendable framework to increase the findability of infectious disease datasets. Scientific Data. 10: 99
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