Shunhua Han, Ph.D.
Affiliations: | 2016-2021 | Institute of Bioinformatics | University of Georgia, Athens, Athens, GA, United States |
Area:
Computational Biology, Genome BiologyWebsite:
https://www.linkedin.com/in/shunhua-han-163a3a75/Google:
"Shunhua Han"Bio:
Shunhua Han is a Bioinformatics Scientist at Illumina. He obtained his PhD in bioinformatics from the University of Georgia with a focus on developing computational methods for studying transposable element activity in Drosophila cell lines.
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Publications
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| Chen J, Basting PJ, Han S, et al. (2023) Reproducible evaluation of transposable element detectors with McClintock 2 guides accurate inference of Ty insertion patterns in yeast. Mobile Dna. 14: 8 |
| Chen J, Basting PJ, Han S, et al. (2023) Reproducible evaluation of transposable element detectors with McClintock 2 guides accurate inference of Ty insertion patterns in yeast. Biorxiv : the Preprint Server For Biology |
| Han S, Dias GB, Basting PJ, et al. (2022) Local assembly of long reads enables phylogenomics of transposable elements in a polyploid cell line. Nucleic Acids Research |
| Han S, Dias GB, Basting PJ, et al. (2022) Ongoing transposition in cell culture reveals the phylogeny of diverse Drosophila S2 sub-lines. Genetics |
| Han S, Basting PJ, Dias GB, et al. (2021) Transposable element profiles reveal cell line identity and loss of heterozygosity in Drosophila cell culture. Genetics. 219 |
| Mariyappa D, Rusch DB, Han S, et al. (2021) A novel transposable element based authentication protocol for Drosophila cell lines. G3 (Bethesda, Md.) |
| Bergman CM, Han S, Nelson MG, et al. (2017) Genomic analysis of P elements in natural populations of Drosophila melanogaster. Peerj. 5: e3824 |