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| Masoudi-Sobhanzadeh Y, Li S, Peng Y, et al. (2024) Interpretable deep residual network uncovers nucleosome positioning and associated features. Nucleic Acids Research |
| Xu W, Zhang H, Guo W, et al. (2024) Deciphering principles of nucleosome interactions and impact of cancer-associated mutations from comprehensive interaction network analysis. Briefings in Bioinformatics. 25 |
| Peng Y, Song W, Teif VB, et al. (2024) Detection of new pioneer transcription factors as cell-type-specific nucleosome binders. Elife. 12 |
| Peng Y, Song W, Teif VB, et al. (2023) Detection of new pioneer transcription factors as cell-type specific nucleosome binders. Biorxiv : the Preprint Server For Biology |
| Li S, Peng Y, Panchenko AR. (2022) DNA methylation: Precise modulation of chromatin structure and dynamics. Current Opinion in Structural Biology. 75: 102430 |
| Li S, Peng Y, Landsman D, et al. (2022) DNA methylation cues in nucleosome geometry, stability and unwrapping. Nucleic Acids Research. 50: 1864-1874 |
| Peng Y, Li S, Onufriev A, et al. (2021) Binding of regulatory proteins to nucleosomes is modulated by dynamic histone tails. Nature Communications. 12: 5280 |
| Peng Y, Markov Y, Goncearenco A, et al. (2020) Data sets on human histone interaction networks. Data in Brief. 33: 106555 |
| Peng Y, Li S, Landsman D, et al. (2020) Histone tails as signaling antennas of chromatin. Current Opinion in Structural Biology. 67: 153-160 |
| Peng Y, Markov Y, Goncearenco A, et al. (2020) Human histone interaction networks: an old concept, new trends. Journal of Molecular Biology |