Ozgun Babur
Affiliations: | University of Massachusetts, Boston, Boston, MA |
Area:
Computational Biology, Systems Biology, Biological Pathways, Proteomics, Causality AnalysisGoogle:
"Ozgun Babur"
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Publications
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| Vishnoi M, Dereli Z, Yin Z, et al. (2024) A prognostic matrix gene expression signature defines functional glioblastoma phenotypes and niches. Research Square |
| Vishnoi M, Dereli Z, Yin Z, et al. (2023) A prognostic matrix code defines functional glioblastoma phenotypes and niches. Research Square |
| Vishnoi M, Dereli Z, Yin Z, et al. (2023) A prognostic matrix code defines functional glioblastoma phenotypes and niches. Biorxiv : the Preprint Server For Biology |
| Yan G, Luna A, Wang H, et al. (2022) BET inhibition induces vulnerability to MCL1 targeting through upregulation of fatty acid synthesis pathway in breast cancer. Cell Reports. 40: 111304 |
| Ostaszewski M, Niarakis A, Mazein A, et al. (2021) COVID-19 Disease Map, a computational knowledge repository of virus-host interaction mechanisms. Molecular Systems Biology. 17: e10851 |
| Luna A, Siper MC, Korkut A, et al. (2021) Analyzing causal relationships in proteomic profiles using CausalPath. Star Protocols. 2: 100955 |
| Wong JV, Franz M, Siper MC, et al. (2021) Author-sourced capture of pathway knowledge in computable form using Biofactoid. Elife. 10 |
| Ostaszewski M, Niarakis A, Mazein A, et al. (2021) COVID19 Disease Map, a computational knowledge repository of virus-host interaction mechanisms. Molecular Systems Biology. 17: e10387 |
| Babur Ö, Luna A, Korkut A, et al. (2021) Causal interactions from proteomic profiles: Molecular data meet pathway knowledge. Patterns (New York, N.Y.). 2: 100257 |
| Balci H, Siper MC, Saleh N, et al. (2020) Newt: a comprehensive web-based tool for viewing, constructing, and analyzing biological maps. Bioinformatics (Oxford, England) |