Saumyadipta Pyne, Ph.D.
Affiliations: | 2006 | Stony Brook University, Stony Brook, NY, United States |
Area:
Algorithms, Computational Biology, Large-scale Text Analytics and Sentiment Analysis, Social Trends Analysis, Combinatorial Computing EnvironmentsGoogle:
"Saumyadipta Pyne"Parents
Sign in to add mentorSteven Skiena | grad student | 2006 | SUNY Stony Brook | |
(Computational studies of gene expression and sequence data in yeast.) |
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Publications
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Wang X, Pyne S, Dinu I. (2014) Gene set enrichment analysis for multiple continuous phenotypes. Bmc Bioinformatics. 15: 260 |
Oliva A, Rosebrock A, Ferrezuelo F, et al. (2013) Cluster Analysis of the Top 750 Cell Cycle–Regulated Genes Plos Biology |
Gordân R, Pyne S, Bulyk ML. (2012) Identification of cell cycle-regulated, putative hyphal genes in Candida albicans. Pacific Symposium On Biocomputing. Pacific Symposium On Biocomputing. 299-310 |
Fan X, Pyne S, Liu JS. (2010) Bayesian meta-analysis for identifying periodically expressed genes in fission yeast cell cycle Annals of Applied Statistics. 4: 988-1013 |
Pyne S, Gutman R, Kim CS, et al. (2009) Phase Coupled Meta-analysis: sensitive detection of oscillations in cell cycle gene expression, as applied to fission yeast. Bmc Genomics. 10: 440 |
Pyne S, Skiena S, Futcher B. (2007) Meta-Analysis of Microarray Data Bioinformatics Algorithms: Techniques and Applications. 329-352 |
Pyne S, Futcher B, Skiena S. (2006) Meta-analysis based on control of false discovery rate: combining yeast ChIP-chip datasets. Bioinformatics (Oxford, England). 22: 2516-22 |
Oliva A, Rosebrock A, Ferrezuelo F, et al. (2005) The cell cycle-regulated genes of Schizosaccharomyces pombe. Plos Biology. 3: e225 |
Pyne S, Skiena S, Futcher B. (2005) Copy correction and concerted evolution in the conservation of yeast genes. Genetics. 170: 1501-13 |