John A. Capra, Ph.D.
Affiliations: | 2009 | Princeton University, Princeton, NJ |
Area:
Computational molecular biology, as well as its interface with machine learning and algorithms.Google:
"John Capra"Parents
Sign in to add mentor| Mona Singh | grad student | 2009 | Princeton | |
| (Algorithms for the identification of functional sites in proteins.) | ||||
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Publications
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| Velazquez-Arcelay K, Colbran LL, McArthur E, et al. (2023) Archaic Introgression Shaped Human Circadian Traits. Genome Biology and Evolution. 15 |
| Brand CM, Colbran LL, Capra JA. (2023) Resurrecting the alternative splicing landscape of archaic hominins using machine learning. Nature Ecology & Evolution |
| Fong SL, Capra JA. (2022) Function and Constraint in Enhancer Sequences with Multiple Evolutionary Origins. Genome Biology and Evolution. 14 |
| Li B, Jin B, Capra JA, et al. (2022) Integration of Protein Structure and Population-Scale DNA Sequence Data for Disease Gene Discovery and Variant Interpretation. Annual Review of Biomedical Data Science |
| Brand CM, Colbran LL, Capra JA. (2022) Predicting Archaic Hominin Phenotypes from Genomic Data. Annual Review of Genomics and Human Genetics |
| Colbran LL, Johnson MR, Mathieson I, et al. (2022) Tracing the Evolution of Human Gene Regulation and Its Association with Shifts in Environment. Genome Biology and Evolution. 13 |
| Fong SL, Capra JA. (2021) Modeling the evolutionary architectures of transcribed human enhancer sequences reveals distinct origins, functions, and associations with human-trait variation. Molecular Biology and Evolution |
| Tang ZZ, Sliwoski GR, Chen G, et al. (2020) PSCAN: Spatial scan tests guided by protein structures improve complex disease gene discovery and signal variant detection. Genome Biology. 21: 217 |
| Tilden DR, Sheehan JH, Newman JH, et al. (2020) Phenotypic Profiling in Subjects Heterozygous for 1 of 2 Rare Variants in the Hypophosphatasia Gene (). Journal of the Endocrine Society. 4: bvaa084 |
| Rinker DC, Simonti CN, McArthur E, et al. (2020) Neanderthal introgression reintroduced functional ancestral alleles lost in Eurasian populations. Nature Ecology & Evolution |