Yongfeng Gu, Ph.D.

Affiliations: 
2008 Boston University, Boston, MA, United States 
Area:
Electronics and Electrical Engineering, Computer Science
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"Yongfeng Gu"

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Martin C. Herbordt grad student 2008 Boston University
 (FPGA acceleration of molecular dynamics simulations.)
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Publications

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Herbordt MC, Gu Y, Vancourt T, et al. (2008) Computing Models for FPGA-Based Accelerators. Computing in Science & Engineering. 10: 35-45
Gu Y, Vancourt T, Herbordt MC. (2008) Explicit Design of FPGA-Based Coprocessors for Short-Range Force Computations in Molecular Dynamics Simulations. Parallel Computing. 34: 261-277
Herbordt MC, Vancourt T, Gu Y, et al. (2007) Achieving High Performance with FPGA-Based Computing. Computer. 40: 50-57
Herbordt MC, Model J, Sukhwani B, et al. (2007) Single Pass Streaming BLAST on FPGAs. Parallel Computing. 33: 741-756
Gu Y, Herbordt MC. (2007) FPGA-based multigrid computation for molecular dynamics simulations Proceedings 2007 Ieee Symposium On Field-Programme Custom Computing Machines, Fccm 2007. 117-126
VanCourt T, Gu Y, Mundada V, et al. (2006) Rigid Molecule Docking: FPGA Reconfiguration for Alternative Force Laws Eurasip Journal On Advances in Signal Processing. 2006
Gu Y, Vancourt T, Herbordt MC. (2006) Improved interpolation and system integration for FPGA-based molecular dynamics simulations Proceedings - 2006 International Conference On Field Programmable Logic and Applications, Fpl. 21-28
Gu Y, Vancourt T, Herbordt MC. (2006) Integrating FPGA acceleration into the protomol molecular dynamics code: Preliminary report Proceedings - 14th Annual Ieee Symposium On Field-Programmable Custom Computing Machines, Fccm 2006. 315-316
Gu Y, Vancourt T, Herbordt MC. (2006) Accelerating molecular dynamics simulations with configurable circuits Iee Proceedings: Computers and Digital Techniques. 153: 189-195
Gu Y, Van Court T, DiSabello D, et al. (2005) Preliminary report: FPGA acceleration of molecular dynamics computations Proceedings - 13th Annual Ieee Symposium On Field-Programmable Custom Computing Machines, Fccm 2005. 2005: 269-270
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