Aravind Subramanian, Ph.D.
Affiliations: | 2005 | Boston University, Boston, MA, United States |
Area:
Biostatistics Biology, Molecular BiologyGoogle:
"Aravind Subramanian"Parents
Sign in to add mentor| Jill P. Mesirov | grad student | 2005 | Boston University | |
| (Statistical and computational methods for molecular signature analysis with applications.) | ||||
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Publications
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| Li T, Kim A, Rosenbluh J, et al. (2018) GeNets: a unified web platform for network-based genomic analyses. Nature Methods |
| Niepel M, Hafner M, Duan Q, et al. (2017) Common and cell-type specific responses to anti-cancer drugs revealed by high throughput transcript profiling. Nature Communications. 8: 1186 |
| Kim JW, Abudayyeh OO, Yeerna H, et al. (2017) Decomposing Oncogenic Transcriptional Signatures to Generate Maps of Divergent Cellular States. Cell Systems. 5: 105-118.e9 |
| Niepel M, Hafner M, Duan Q, et al. (2017) Abstract IA05: New methods and better theory for pre-clinical cancer pharmacogenomics Cancer Research. 77 |
| Kim E, Ilic N, Shrestha Y, et al. (2016) Systematic functional interrogation of rare cancer variants identifies oncogenic alleles. Cancer Discovery |
| Berger A, Kim E, Brooks A, et al. (2015) Abstract 957: Towards precision functional genomics via next-generation functional mapping of cancer variants Molecular and Cellular Biology |
| Sharifnia T, Rusu V, Piccioni F, et al. (2014) Genetic modifiers of EGFR dependence in non-small cell lung cancer. Proceedings of the National Academy of Sciences of the United States of America. 111: 18661-6 |
| Liberzon A, Subramanian A, Pinchback R, et al. (2011) Molecular signatures database (MSigDB) 3.0. Bioinformatics (Oxford, England). 27: 1739-40 |
| Novershtern N, Subramanian A, Lawton LN, et al. (2011) Densely interconnected transcriptional circuits control cell states in human hematopoiesis. Cell. 144: 296-309 |
| Vicent S, Chen R, Sayles LC, et al. (2010) Wilms tumor 1 (WT1) regulates KRAS-driven oncogenesis and senescence in mouse and human models. The Journal of Clinical Investigation. 120: 3940-52 |