Roland Dunbrack, Ph.D.
Affiliations: | Computer and Information Science | Temple University, Philadelphia, PA, United States |
Area:
Information Science, Computer Science, Bioinformatics BiologyWebsite:
http://dunbrack.fccc.eduGoogle:
"Roland Dunbrack"Parents
Sign in to add mentor| Martin Karplus | grad student | 1987-1993 | Harvard (Chemistry Tree) |
| Fred Cohen | post-doc | UCSF (Neurotree) |
Children
Sign in to add trainee| Jared Adolf-Bryfogle | grad student | (Microtree) | |
| Brian Weitzner | grad student | Johns Hopkins (Computational Biology Tree) | |
| Qifang Xu | grad student | Temple University (Computational Biology Tree) | |
| Joanna S. Slusky | post-doc | Fox Chase Cancer Center (Chemistry Tree) |
BETA: Related publications
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Publications
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| Hernandez NE, Jankowski W, Frick R, et al. (2023) Corrigendum to "Computational design of nanomolar-binding antibodies specific to multiple SARS-CoV-2 variants by engineering a specificity switch of antibody 80R using RosettaAntibodyDesign (RAbD) results in potential generalizable therapeutic antibodies for novel SARS-CoV-2 virus" [Heliyon 9(4) (April 2023) e15032]. Heliyon. 9: e17901 |
| Schweke H, Xu Q, Tauriello G, et al. (2023) Discriminating physiological from non-physiological interfaces in structures of protein complexes: A community-wide study. Proteomics. e2200323 |
| Hernandez NE, Jankowski W, Frick R, et al. (2023) Computational design of nanomolar-binding antibodies specific to multiple SARS-CoV-2 variants by engineering a specificity switch of antibody 80R using RosettaAntibodyDesign (RAbD) results in potential generalizable therapeutic antibodies for novel SARS-CoV-2 virus. Heliyon. 9: e15032 |
| Wasserman JS, Faezov B, Patel KR, et al. (2023) FAM122A ensures cell cycle interphase progression and checkpoint control as a SLiM-dependent substrate-competitive inhibitor to the B55⍺/PP2A phosphatase. Biorxiv : the Preprint Server For Biology |
| Xu Q, Dunbrack RL. (2022) The protein common assembly database (ProtCAD)-a comprehensive structural resource of protein complexes. Nucleic Acids Research |
| Le KH, Adolf-Bryfogle J, Klima JC, et al. (2021) PyRosetta Jupyter Notebooks Teach Biomolecular Structure Prediction and Design. Biophysicist (Rockville, Md.). 2: 108-122 |
| Fowle H, Zhao Z, Xu Q, et al. (2021) PP2A/B55α substrate recruitment as defined by the retinoblastoma-related protein p107. Elife. 10 |
| Kelow SP, Adolf-Bryfogle J, Dunbrack RL. (2020) Hiding in plain sight: structure and sequence analysis reveals the importance of the antibody DE loop for antibody-antigen binding. Mabs. 12: 1840005 |
| Leman JK, Weitzner BD, Lewis SM, et al. (2020) Macromolecular modeling and design in Rosetta: recent methods and frameworks. Nature Methods |
| Koehler Leman J, Weitzner BD, Renfrew PD, et al. (2020) Better together: Elements of successful scientific software development in a distributed collaborative community. Plos Computational Biology. 16: e1007507 |