Stephen W. Tanner, Ph.D.
Affiliations: | 2007 | University of California, San Diego, La Jolla, CA |
Area:
Bioinformatics BiologyGoogle:
"Stephen Tanner"Parents
Sign in to add mentor| Vineet Bafna | grad student | 2007 | UCSD | |
| (Efficient and accurate bioinformatics algorithms for peptide mass spectrometry.) | ||||
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Publications
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| Payne SH, Yau M, Smolka MB, et al. (2008) Phosphorylation-specific MS/MS scoring for rapid and accurate phosphoproteome analysis. Journal of Proteome Research. 7: 3373-81 |
| Frank AM, Bandeira N, Shen Z, et al. (2008) Clustering millions of tandem mass spectra. Journal of Proteome Research. 7: 113-22 |
| Tanner S, Payne SH, Dasari S, et al. (2008) Accurate annotation of peptide modifications through unrestrictive database search. Journal of Proteome Research. 7: 170-81 |
| Gupta N, Tanner S, Jaitly N, et al. (2007) Whole proteome analysis of post-translational modifications: applications of mass-spectrometry for proteogenomic annotation. Genome Research. 17: 1362-77 |
| Tanner S, Shen Z, Ng J, et al. (2007) Improving gene annotation using peptide mass spectrometry. Genome Research. 17: 231-9 |
| Tanner S, Pevzner PA, Bafna V. (2006) Unrestrictive identification of post-translational modifications through peptide mass spectrometry. Nature Protocols. 1: 67-72 |
| Wilmarth PA, Tanner S, Dasari S, et al. (2006) Age-related changes in human crystallins determined from comparative analysis of post-translational modifications in young and aged lens: does deamidation contribute to crystallin insolubility? Journal of Proteome Research. 5: 2554-66 |
| Tsur D, Tanner S, Zandi E, et al. (2005) Identification of post-translational modifications via blind search of mass-spectra. Proceedings / Ieee Computational Systems Bioinformatics Conference, Csb. Ieee Computational Systems Bioinformatics Conference. 157-66 |
| Tsur D, Tanner S, Zandi E, et al. (2005) Identification of post-translational modifications by blind search of mass spectra. Nature Biotechnology. 23: 1562-7 |
| Frank A, Tanner S, Bafna V, et al. (2005) Peptide sequence tags for fast database search in mass-spectrometry. Journal of Proteome Research. 4: 1287-95 |