Homayoun Valafar
Affiliations: | Computer Science & Engineering | University of South Carolina, Columbia, SC |
Area:
Computer Science, Artificial IntelligenceWebsite:
https://www.cse.sc.edu/~homayoun/Google:
"Homayoun Valafar"Bio:
https://www.proquest.com/openview/a95d2a7f866a43355615cc7944c33a8d/1
Parents
Sign in to add mentor| Okan K. Ersoy | grad student | 1995 | Purdue | |
| (A new combinatorial optimization technique and its applications) | ||||
Children
Sign in to add trainee| Xijiang Miao | grad student | 2007 | University of South Carolina |
| Rishi Mukhopadhyay | grad student | 2010 | University of South Carolina |
| Timothy M. Fawcett | grad student | 2012 | University of South Carolina |
| Paul Shealy | grad student | 2012 | University of South Carolina |
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Publications
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| Abdollahi H, Prestegard JH, Valafar H. (2023) Computational modeling multiple conformational states of proteins with residual dipolar coupling data. Current Opinion in Structural Biology. 82: 102655 |
| Omar H, Hein A, Cole CA, et al. (2022) Concurrent Identification and Characterization of Protein Structure and Continuous Internal Dynamics with REDCRAFT. Frontiers in Molecular Biosciences. 9: 806584 |
| Cole CA, Daigham NS, Liu G, et al. (2021) REDCRAFT: A computational platform using residual dipolar coupling NMR data for determining structures of perdeuterated proteins in solution. Plos Computational Biology. 17: e1008060 |
| Cole C, Parks C, Rachele J, et al. (2020) Increased usability, algorithmic improvements and incorporation of data mining for structure calculation of proteins with REDCRAFT software package. Bmc Bioinformatics. 21: 204 |
| Nag A, Valafar H, Pandala N. (2020) A Study of Nonstructural Protein 1 of SARS Coronavirus The Faseb Journal. 34: 1-1 |
| Sala D, Huang YJ, Cole CA, et al. (2019) Protein Structure Prediction Assisted with Sparse NMR Data in CASP13. Proteins |
| Cole CA, Mukhopadhyay R, Omar H, et al. (2016) Structure Calculation and Reconstruction of Discrete State Dynamics from Residual Dipolar Couplings. Journal of Chemical Theory and Computation |
| Fahim A, Irausquin S, Valafar H. (2016) nD-PDPA: n-Dimensional Probability Density Profile Analysis Emerging Trends in Applications and Infrastructures For Computational Biology, Bioinformatics, and Systems Biology: Systems and Applications. 181-196 |
| Cole CA, Ishimaru D, Hennig M, et al. (2016) Structure Calculation of α, α/β, β Proteins from Residual Dipolar Coupling Data Using Redcraft Emerging Trends in Applications and Infrastructures For Computational Biology, Bioinformatics, and Systems Biology: Systems and Applications. 75-89 |
| Simin M, Irausquin S, Cole CA, et al. (2014) Improvements to REDCRAFT: a software tool for simultaneous characterization of protein backbone structure and dynamics from residual dipolar couplings. Journal of Biomolecular Nmr. 60: 241-64 |