Rishi Mukhopadhyay, Ph.D.

Affiliations: 
2010 Computer Science & Engineering University of South Carolina, Columbia, SC 
Area:
Computer Science, Bioinformatics Biology
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"Rishi Mukhopadhyay"

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Homayoun Valafar grad student 2010 University of South Carolina
 (Dynafold: A dynamic programming approach to protein structure calculation from residual dipolar couplings.)
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Publications

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Cole CA, Mukhopadhyay R, Omar H, et al. (2016) Structure Calculation and Reconstruction of Discrete State Dynamics from Residual Dipolar Couplings. Journal of Chemical Theory and Computation
Mukhopadhyay R, Irausquin S, Schmidt C, et al. (2014) Dynafold: a dynamic programming approach to protein backbone structure determination from minimal sets of Residual Dipolar Couplings. Journal of Bioinformatics and Computational Biology. 12: 1450002
Fahim A, Mukhopadhyay R, Yandle R, et al. (2013) Protein structure validation and identification from unassigned residual dipolar coupling data using 2D-PDPA. Molecules (Basel, Switzerland). 18: 10162-88
Park SH, Son WS, Mukhopadhyay R, et al. (2009) Phage-induced alignment of membrane proteins enables the measurement and structural analysis of residual dipolar couplings with dipolar waves and lambda-maps. Journal of the American Chemical Society. 131: 14140-1
Mukhopadhyay R, Miao X, Shealy P, et al. (2009) Efficient and accurate estimation of relative order tensors from lambda-maps. Journal of Magnetic Resonance (San Diego, Calif. : 1997). 198: 236-47
Miao X, Mukhopadhyay R, Valafar H. (2008) Estimation of relative order tensors, and reconstruction of vectors in space using unassigned RDC data and its application. Journal of Magnetic Resonance (San Diego, Calif. : 1997). 194: 202-11
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