Amin Espah Borujeni, Ph.D.
Affiliations: | Sharif University of Technology, Tehran, Tehran Province, Iran | ||
| Delft University of Technology, Delft, Zuid-Holland, Netherlands | |||
| Pennsylvania State University, State College, PA, United States | |||
| Massachusetts Institute of Technology, Cambridge, MA, United States |
Area:
Chemical Engineering, Biophysical Modeling, Synthetic BiologyGoogle:
"Amin Espah Borujeni"Parents
Sign in to add mentor| Joseph (Sef) J. Heijnen | grad student | 2007-2009 | Delft University of Technology (Chemistry Tree) |
| Howard M. Salis | grad student | 2009-2015 | Penn State |
| Christopher A. Voigt | post-doc | 2016- | MIT (Chemistry Tree) |
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Publications
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| Espah Borujeni A, Zhang J, Doosthosseini H, et al. (2020) Genetic circuit characterization by inferring RNA polymerase movement and ribosome usage. Nature Communications. 11: 5001 |
| Park Y, Espah Borujeni A, Gorochowski TE, et al. (2020) Precision design of stable genetic circuits carried in highly-insulated E. coli genomic landing pads. Molecular Systems Biology. 16: e9584 |
| Fontanarrosa P, Doosthosseini H, Espah Borujeni A, et al. (2020) Genetic Circuit Dynamics: Hazard and Glitch Analysis. Acs Synthetic Biology |
| Moser F, Espah Borujeni A, Ghodasara AN, et al. (2018) Dynamic control of endogenous metabolism with combinatorial logic circuits. Molecular Systems Biology. 14: e8605 |
| Gorochowski TE, Espah Borujeni A, Park Y, et al. (2017) Genetic circuit characterization and debugging using RNA-seq. Molecular Systems Biology. 13: 952 |
| Espah Borujeni A, Cetnar D, Farasat I, et al. (2017) Precise quantification of translation inhibition by mRNA structures that overlap with the ribosomal footprint in N-terminal coding sequences. Nucleic Acids Research |
| Espah Borujeni A, Salis HM. (2016) Translation Initiation is Controlled by RNA Folding Kinetics via a Ribosome Drafting Mechanism. Journal of the American Chemical Society |
| Espah Borujeni A, Mishler DM, Wang J, et al. (2015) Automated physics-based design of synthetic riboswitches from diverse RNA aptamers. Nucleic Acids Research |
| Espah Borujeni A, Channarasappa AS, Salis HM. (2014) Translation rate is controlled by coupled trade-offs between site accessibility, selective RNA unfolding and sliding at upstream standby sites. Nucleic Acids Research. 42: 2646-59 |