John G. Gibbons, Ph.D.
Affiliations: | Vanderbilt University, Nashville, TN |
Area:
Population genetics, evolutionGoogle:
"John Gibbons"Parents
Sign in to add mentor| David E. McCauley | grad student | 2012 | Vanderbilt | |
| (The function and evolution of the Aspergillus genome.) | ||||
| Antonis Rokas | grad student | 2007-2012 | Vanderbilt (Computational Biology Tree) | |
| Bernardo L. Silva | post-doc | Harvard School of Public Health | ||
Children
Sign in to add trainee| Kimberly Acevedo | grad student | U Mass Amherst | |
| Tyler Bechtel | grad student | U Mass Amherst | |
| Katherine Chacon-Vargas | grad student | UMass Amhest | |
| Stefanie Farrington | grad student | Clark University | |
| Julianne Murphy | grad student | Clark University | |
| Matthew Rosienski | grad student | Clark University | |
| Natalya Specian | grad student | Clark University | |
| Shu Zhao | grad student | UMass Amhest | |
| Jacob L. Steenwyk | grad student | 2016 | Clark University |
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Publications
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| Acevedo KL, Eaton E, Leite J, et al. (2025) Population genomics of Aspergillus sojae is shaped by the food environment. Genome Biology and Evolution |
| Luo M, Han Y, Sun Y, et al. (2025) Variability of Lactic Acid Bacteria in Curcumin Metabolism and Its Biological Implications. Journal of Agricultural and Food Chemistry |
| Luo M, Wong S, Thanuphol P, et al. (2024) Isolation and Identification of Human Gut Bacteria Capable of Converting Curcumin to Its Hydrogenated Metabolites. Journal of Agricultural and Food Chemistry |
| Bechtel TD, Hershelman J, Ghoshal M, et al. (2024) Chemical mutagenesis of Listeria monocytogenes for increased tolerance to benzalkonium chloride shows independent genetic underpinnings and off-target antibiotic resistance. Plos One. 19: e0305663 |
| Ghoshal M, Bechtel TD, Gibbons JG, et al. (2024) Transcriptomic analysis using RNA sequencing and phenotypic analysis of after acid exposure for different time durations using adaptive laboratory evolution. Frontiers in Microbiology. 15: 1348063 |
| Steenwyk JL, Balamurugan C, Raja HA, et al. (2024) Phylogenomics reveals extensive misidentification of fungal strains from the genus . Microbiology Spectrum. e0398023 |
| Ghoshal M, Bechtel TD, Gibbons JG, et al. (2023) Adaptive laboratory evolution of in acid stress. Frontiers in Microbiology. 14: 1285421 |
| Sierra-Patev S, Min B, Naranjo-Ortiz M, et al. (2023) A global phylogenomic analysis of the shiitake genus . Proceedings of the National Academy of Sciences of the United States of America. 120: e2214076120 |
| Gibbons JG, D'Avino P, Zhao S, et al. (2022) Comparative Genomics Reveals a Single Nucleotide Deletion in That Results in White-Spore Phenotype in Natural Variants of . Frontiers in Fungal Biology. 3: 897954 |
| Zhao S, Martin-Vicente A, Colabardini AC, et al. (2022) Genomic and Molecular Identification of Genes Contributing to the Caspofungin Paradoxical Effect in . Microbiology Spectrum. e0051922 |