Hiroshi Akashi
Affiliations: | Pennsylvania State University, State College, PA, United States |
Area:
molecular evolutionWebsite:
http://www.bio.psu.edu/People/Faculty/Akashi/Google:
"Hiroshi Akashi"Cross-listing: FlyTree
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Publications
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| Matsumoto T, Akashi H. (2018) Distinguishing Among Evolutionary Forces Acting on Genome-Wide Base Composition: Computer Simulation Analysis of Approximate Methods for Inferring Site Frequency Spectra of Derived Mutations in Recombining Regions. G3 (Bethesda, Md.) |
| Matsumoto T, John A, Baeza-Centurion P, et al. (2016) Codon usage selection can bias estimation of the fraction of adaptive amino acid fixations. Molecular Biology and Evolution |
| Mallik S, Akashi H, Kundu S. (2015) Assembly constraints drive co-evolution among ribosomal constituents. Nucleic Acids Research. 43: 5352-63 |
| Matsumoto T, Akashi H, Yang Z. (2015) Evaluation of Ancestral Sequence Reconstruction Methods to Infer Nonstationary Patterns of Nucleotide Substitution. Genetics. 200: 873-90 |
| Akashi H, Osada N, Ohta T. (2012) Weak selection and protein evolution. Genetics. 192: 15-31 |
| Tezuka A, Matsushima N, Nemoto Y, et al. (2012) Comprehensive primer design for analysis of population genetics in non-sequenced organisms. Plos One. 7: e32314 |
| Osada N, Akashi H. (2012) Mitochondrial-nuclear interactions and accelerated compensatory evolution: evidence from the primate cytochrome C oxidase complex. Molecular Biology and Evolution. 29: 337-46 |
| Clark AG, Eisen MB, et al. (2007) Evolution of genes and genomes on the Drosophila phylogeny. Nature. 450: 203-18 |
| Akashi H, Goel P, John A. (2007) Ancestral inference and the study of codon bias evolution: implications for molecular evolutionary analyses of the Drosophila melanogaster subgroup. Plos One. 2: e1065 |
| Ko WY, Piao S, Akashi H. (2006) Strong regional heterogeneity in base composition evolution on the Drosophila X chromosome. Genetics. 174: 349-62 |