Michael A. Gilchrist, Ph. D
Affiliations: | Ecology and Evolutionary Biology | The University of Tennessee, Knoxville, TN, United States |
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"Michael Gilchrist"Cross-listing: Computational Biology Tree
Parents
Sign in to add mentor| Janis Antonovics | grad student | 1996-2001 | Duke | |
| (Virulence, transmission, and added mortality: Measuring and modeling the relationships that drive parasite evolution.) | ||||
| William G. Wilson | grad student | 1996-2001 | Duke | |
| (Virulence, transmission, and added mortality: Measuring and modeling the relationships that drive parasite evolution.) | ||||
Children
Sign in to add trainee| Premal Shah | grad student | 2006-2011 | University of Tennessee, Knoxville |
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Publications
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| Landerer C, O'Meara BC, Zaretzki R, et al. (2020) Unlocking a signal of introgression from codons in Lachancea kluyveri using a mutation-selection model. Bmc Evolutionary Biology. 20: 109 |
| Jiao J, Gilchrist MA, Fefferman NH. (2020) The impact of host metapopulation structure on short-term evolutionary rescue in the face of a novel pathogenic threat Global Ecology and Conservation. 23 |
| Beaulieu JM, O'Meara BC, Zaretzki R, et al. (2018) Population Genetics Based Phylogenetics Under Stabilizing Selection for an Optimal Amino Acid Sequence: A Nested Modeling Approach. Molecular Biology and Evolution |
| Cope AL, Hettich RL, Gilchrist MA. (2018) Quantifying codon usage in signal peptides: Gene expression and amino acid usage explain apparent selection for inefficient codons. Biochimica Et Biophysica Acta. Biomembranes. 1860: 2479-2485 |
| Kubatko L, Shah P, Herbei R, et al. (2015) A codon model of nucleotide substitution with selection on synonymous codon usage. Molecular Phylogenetics and Evolution |
| Gilchrist MA, Chen WC, Shah P, et al. (2015) Estimating Gene Expression and Codon-Specific Translational Efficiencies, Mutation Biases, and Selection Coefficients from Genomic Data Alone. Genome Biology and Evolution. 7: 1559-79 |
| Sullivan AM, Zhao X, Suzuki Y, et al. (2013) Evidence for finely-regulated asynchronous growth of Toxoplasma gondii cysts based on data-driven model selection. Plos Computational Biology. 9: e1003283 |
| Shah P, Gilchrist MA. (2011) Explaining complex codon usage patterns with selection for translational efficiency, mutation bias, and genetic drift. Proceedings of the National Academy of Sciences of the United States of America. 108: 10231-6 |
| Shah P, Gilchrist MA. (2010) Effect of correlated tRNA abundances on translation errors and evolution of codon usage bias. Plos Genetics. 6: e1001128 |
| Shah P, Gilchrist MA. (2010) Is thermosensing property of RNA thermometers unique? Plos One. 5: e11308 |