Emmanuel Prestat, Ph.D
Affiliations: | Laboratoire Ampère | Ecole Centrale de Lyon, Université de Lyon, France |
Area:
Metagenomics, bioinformatics, prokaryotesWebsite:
http://www.genomenviron.org/People/Prestat/Prestat.htmlGoogle:
"Emmanuel Prestat"Parents
Sign in to add mentor| Christian Gautier | grad student | 2005-2009 | Université Claude Bernard Lyon 1 |
| Timothy Moore Vogel | post-doc | 2009- | Ecole Centrale de Lyon, Université de Lyon, France |
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Publications
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| Borderes M, Gasc C, Prestat E, et al. (2021) A comprehensive evaluation of binning methods to recover human gut microbial species from a non-redundant reference gene catalog. Nar Genomics and Bioinformatics. 3: lqab009 |
| Taş N, Prestat E, Wang S, et al. (2018) Landscape topography structures the soil microbiome in arctic polygonal tundra. Nature Communications. 9: 777 |
| Men Y, Yu K, Bælum J, et al. (2017) Metagenomic and metatranscriptomic analyses reveal structure and dynamics of a dechlorinating community containing Dehalococcoides mccartyi and corrinoid-providing microorganisms under cobalamin-limited condition. Applied and Environmental Microbiology |
| Delmont TO, Eren AM, Maccario L, et al. (2015) Reconstructing rare soil microbial genomes using in situ enrichments and metagenomics. Frontiers in Microbiology. 6: 358 |
| Prestat E, David MM, Hultman J, et al. (2014) FOAM (Functional Ontology Assignments for Metagenomes): a Hidden Markov Model (HMM) database with environmental focus. Nucleic Acids Research. 42: e145 |
| Lamendella R, Strutt S, Borglin S, et al. (2014) Assessment of the Deepwater Horizon oil spill impact on Gulf coast microbial communities. Frontiers in Microbiology. 5: 130 |
| TaÅŸ N, Prestat E, McFarland JW, et al. (2014) Impact of fire on active layer and permafrost microbial communities and metagenomes in an upland Alaskan boreal forest. The Isme Journal. 8: 1904-19 |
| David MM, Cecillon S, Warne BM, et al. (2014) Microbial ecology of chlorinated solvent biodegradation. Environmental Microbiology |
| Mason OU, Scott NM, Gonzalez A, et al. (2014) Metagenomics reveals sediment microbial community response to Deepwater Horizon oil spill. The Isme Journal. 8: 1464-75 |
| Larose C, Prestat E, Cecillon S, et al. (2013) Interactions between snow chemistry, mercury inputs and microbial population dynamics in an Arctic snowpack. Plos One. 8: e79972 |