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Chia M, Li C, Marques S, et al. (2021) High-resolution analysis of cell-state transitions in yeast suggests widespread transcriptional tuning by alternative starts. Genome Biology. 22: 34 |
Wang J, Li B, Marques S, et al. (2020) TIF-Seq2 disentangles overlapping isoforms in complex human transcriptomes. Nucleic Acids Research |
Liang S, Ezerskyte M, Wang J, et al. (2020) Transcriptional mutagenesis dramatically alters genome-wide p53 transactivation landscape. Scientific Reports. 10: 13513 |
Wu M, Karadoulama E, Lloret-Llinares M, et al. (2020) The RNA exosome shapes the expression of key protein-coding genes. Nucleic Acids Research |
Thomas QA, Ard R, Liu J, et al. (2020) Transcript isoform sequencing reveals widespread promoter-proximal transcriptional termination in Arabidopsis. Nature Communications. 11: 2589 |
Wei W, Hennig BP, Wang J, et al. (2019) Chromatin-sensitive cryptic promoters putatively drive expression of alternative protein isoforms in yeast. Genome Research |
Garcia-Moreno M, Noerenberg M, Ni S, et al. (2019) System-wide Profiling of RNA-Binding Proteins Uncovers Key Regulators of Virus Infection. Molecular Cell |
Nielsen M, Ard R, Leng X, et al. (2019) Transcription-driven Chromatin repression of Intragenic transcription start sites. Plos Genetics. 15: e1007969 |
Gaviraghi M, Vivori C, Pareja Sanchez Y, et al. (2018) Tumor suppressor PNRC1 blocks rRNA maturation by recruiting the decapping complex to the nucleolus. The Embo Journal |
Garre E, Pelechano V, Sánchez Del Pino M, et al. (2018) The Lsm1-7/Pat1 complex binds to stress-activated mRNAs and modulates the response to hyperosmotic shock. Plos Genetics. 14: e1007563 |