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Marsch-Martínez N, Reyes-Olalde JI, Chalfun-Junior A, et al. (2022) Twisting development, the birth of a potential new gene. Iscience. 25: 105627
Delaye L, Vargas C, Latorre A, et al. (2020) Inferring Horizontal Gene Transfer with DarkHorse, Phylomizer, and ETE Toolkits. Methods in Molecular Biology (Clifton, N.J.). 2075: 355-369
Trasviña-Arenas CH, David SS, Delaye L, et al. (2019) Evolution of Base Excision Repair in Entamoeba histolytica is shaped by gene loss, gene duplication, and lateral gene transfer. Dna Repair. 76: 76-88
Delaye L, Ruiz-Ruiz S, Calderon E, et al. (2018) Evidence of the Red-Queen hypothesis from accelerated rates of evolution of genes involved in biotic interactions in Pneumocystis. Genome Biology and Evolution
Martínez-Cano DJ, Bor G, Moya A, et al. (2018) Testing the Domino Theory of Gene Loss in : The Relevance of Epistatic Interactions. Life (Basel, Switzerland). 8
Vlasova A, Capella-Gutiérrez S, Rendón-Anaya M, et al. (2016) Genome and transcriptome analysis of the Mesoamerican common bean and the role of gene duplications in establishing tissue and temporal specialization of genes. Genome Biology. 17: 32
Schmoll M, Dattenböck C, Carreras-Villaseñor N, et al. (2016) The Genomes of Three Uneven Siblings: Footprints of the Lifestyles of Three Trichoderma Species. Microbiology and Molecular Biology Reviews : Mmbr. 80: 205-327
Martínez-Cano DJ, Reyes-Prieto M, Martínez-Romero E, et al. (2014) Evolution of small prokaryotic genomes. Frontiers in Microbiology. 5: 742
Encinas D, Garcillán-Barcia MP, Santos-Merino M, et al. (2014) Plasmid conjugation from proteobacteria as evidence for the origin of xenologous genes in cyanobacteria. Journal of Bacteriology. 196: 1551-9
María Velasco A, Becerra A, Hernández-Morales R, et al. (2013) Low complexity regions (LCRs) contribute to the hypervariability of the HIV-1 gp120 protein. Journal of Theoretical Biology. 338: 80-6
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