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Andrew D. Kern

Affiliations: 
Institute of Ecology and Evolution University of Oregon, Eugene, OR, United States 
Area:
Population and Comparative Genomics
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"Andrew Kern"
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Parents

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David Begun grad student 2000-2005 UC Davis
John H. Gillespie grad student 2000-2005 UC Davis
David Henry Haussler post-doc 2005-2008 UC Santa Cruz (Computational Biology Tree)

Children

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Murillo F Rodrigues grad student 2018- University of Oregon (Evolution Tree)
Gabrielle Coffing grad student 2019- University of Oregon
Clara T. Rehmann grad student 2020- University of Oregon
Jordan Rodriguez grad student 2022- University of Oregon
Daniel N. Hupalo grad student 2009-2014 Dartmouth
Alexander G. Shanku grad student 2010-2016 Dartmouth/Rutgers
Vince Buffalo post-doc 2019- University of Oregon (Evolution Tree)
Saurabh Belsare post-doc 2020- University of Oregon (Chemistry Tree)
Bryan Kolaczkowski post-doc 2009-2010 Dartmouth (Evolution Tree)
Elizabeth H B Hellen post-doc 2013-2014 Rutgers, New Brunswick (Computational Biology Tree)
Daniel R. Schrider post-doc 2013-2018 Rutgers, New Brunswick
Alexander Xue post-doc 2017-2018 Rutgers - The State University of New Jersey
CJ Battey post-doc 2018-2020 University of Oregon
Jeffrey Adrion post-doc 2018-2021 University of Oregon
Chris C. R. Smith post-doc 2021-2023 University of Oregon
Jordan Anderson post-doc 2022-2023 University of Oregon

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Publications

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Smith CCR, Patterson G, Ralph PL, et al. (2024) Estimation of spatial demographic maps from polymorphism data using a neural network. Biorxiv : the Preprint Server For Biology
Buffalo V, Kern AD. (2024) A quantitative genetic model of background selection in humans. Plos Genetics. 20: e1011144
Coffing GC, Tittes S, Small ST, et al. (2024) Cephalopod Sex Determination and its Ancient Evolutionary Origin Revealed by Chromosome-level Assembly of the California Two-Spot Octopus. Biorxiv : the Preprint Server For Biology
Rodrigues MF, Kern AD, Ralph PL. (2024) Shared evolutionary processes shape landscapes of genomic variation in the great apes. Genetics
Rehmann CT, Ralph PL, Kern AD. (2024) Evaluating evidence for co-geography in the Anopheles-Plasmodium host-parasite system. G3 (Bethesda, Md.)
Rehmann CT, Ralph PL, Kern AD. (2023) Evaluating evidence for co-geography in the Anopheles Plasmodium host-parasite system. Biorxiv : the Preprint Server For Biology
Lauterbur ME, Cavassim MIA, Gladstein AL, et al. (2023) Expanding the stdpopsim species catalog, and lessons learned for realistic genome simulations. Elife. 12
Smith CCR, Tittes S, Ralph PL, et al. (2023) Dispersal inference from population genetic variation using a convolutional neural network. Genetics
Small ST, Costantini C, Sagnon N, et al. (2023) Standing genetic variation and chromosome differences drove rapid ecotype formation in a major malaria mosquito. Proceedings of the National Academy of Sciences of the United States of America. 120: e2219835120
Rodrigues MF, Kern AD, Ralph PL. (2023) Shared evolutionary processes shape landscapes of genomic variation in the great apes. Biorxiv : the Preprint Server For Biology
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