| Year |
Citation |
Score |
| 2024 |
Greenspan ZS, Barter TT, Phillips MA, Ranz JM, Rose MR, Mueller LD. Genomewide architecture of adaptation in experimentally evolved characterized by widespread pleiotropy. Journal of Genetics. 103. PMID 38258319 |
0.358 |
|
| 2023 |
Clifton BD, Hariyani I, Kimura A, Luo F, Nguyen A, Ranz JM. Paralog transcriptional differentiation in the D. melanogaster-specific gene family Sdic across populations and spermatogenesis stages. Communications Biology. 6: 1069. PMID 37864070 DOI: 10.1038/s42003-023-05427-4 |
0.412 |
|
| 2023 |
Ranz JM, Go AC, González PM, Clifton BD, Gomes S, Jaberyzadeh A, Woodbury A, Chan C, Gandasetiawan KA, Jayasekera S, Gaudreau C, Ma HC, Salceda VM, Abreu-Goodger C, Civetta A. Gene Expression Differentiation In The Reproductive Tissues Of Drosophila willistoni Subspecies And Their Hybrids. Molecular Ecology. PMID 37000122 DOI: 10.1111/mec.16941 |
0.498 |
|
| 2022 |
Ranz JM, González PM, Su RN, Bedford SJ, Abreu-Goodger C, Markow T. Multiscale analysis of the randomization limits of the chromosomal gene organization between Lepidoptera and Diptera. Proceedings. Biological Sciences. 289: 20212183. PMID 35042416 DOI: 10.1098/rspb.2021.2183 |
0.5 |
|
| 2021 |
Jayaswal V, Ndo C, Ma HC, Clifton B, Pombi M, Cabrera K, Couhet A, Mouline K, Diabaté A, Dabiré R, Ayala D, Ranz JM. Intraspecific transcriptome variation and sex-biased expression in Anopheles arabiensis. Genome Biology and Evolution. PMID 34432020 DOI: 10.1093/gbe/evab199 |
0.495 |
|
| 2021 |
Patlar B, Jayaswal V, Ranz JM, Civetta A. Nonadaptive molecular evolution of seminal fluid proteins in Drosophila. Evolution; International Journal of Organic Evolution. PMID 34184267 DOI: 10.1111/evo.14297 |
0.385 |
|
| 2021 |
Ranz JM, González PM, Clifton BD, Nazario-Yepiz NO, Hernández-Cervantes PL, Palma-Martínez MJ, Valdivia DI, Jiménez-Kaufman A, Lu MM, Markow TA, Abreu-Goodger C. A de novo transcriptional atlas in Danaus plexippus reveals variability in dosage compensation across tissues. Communications Biology. 4: 791. PMID 34172835 DOI: 10.1038/s42003-021-02335-3 |
0.466 |
|
| 2020 |
Clifton B, Jimenez J, Kimura A, Chahine Z, Librado P, Sanchez-Gracia A, Abbassi M, Carranza F, Chan C, Marchetti M, Zhang W, Shi M, Vu C, Yeh S, Fanti L, ... ... Ranz JM, et al. Understanding the early evolutionary stages of a tandem D. melanogaster-specific gene family: a structural and functional population study. Molecular Biology and Evolution. PMID 32359138 DOI: 10.1093/Molbev/Msaa109 |
0.681 |
|
| 2019 |
Civetta A, Ranz JM. Genetic Factors Influencing Sperm Competition. Frontiers in Genetics. 10: 820. PMID 31572439 DOI: 10.3389/fgene.2019.00820 |
0.436 |
|
| 2019 |
Barter TT, Greenspan ZS, Phillips MA, Mueller LD, Rose MR, Ranz JM. Drosophila transcriptomics with and without ageing. Biogerontology. PMID 31317291 DOI: 10.1007/s10522-019-09823-4 |
0.354 |
|
| 2019 |
Ranz J, Clifton B. Characterization and evolutionary dynamics of complex regions in eukaryotic genomes. Science China. Life Sciences. PMID 30810961 DOI: 10.1007/s11427-018-9458-0 |
0.446 |
|
| 2018 |
Jayaswal V, Jimenez J, Magie R, Nguyen K, Clifton B, Yeh S, Ranz JM. A species-specific multigene family mediates differential sperm displacement in Drosophila melanogaster. Evolution; International Journal of Organic Evolution. PMID 29315521 DOI: 10.1111/Evo.13417 |
0.562 |
|
| 2016 |
Clifton BD, Librado P, Yeh SD, Solares E, Real D, Jayasekera S, Zhang W, Shi M, Park R, Magie R, Ma HC, Xia XQ, Marco A, Rozas J, Ranz JM. Rapid Functional And Sequence Differentiation of a Tandemly-Repeated Species-Specific Multigene Family in Drosophila. Molecular Biology and Evolution. PMID 27702774 DOI: 10.1093/Molbev/Msw212 |
0.707 |
|
| 2016 |
Mardiros XB, Park R, Clifton B, Grewal G, Khizar AK, Markow TA, Ranz JM, Civetta A. Postmating Reproductive isolation between strains of Drosophila willistoni. Fly. 0. PMID 27268100 DOI: 10.1080/19336934.2016.1197448 |
0.365 |
|
| 2015 |
Chan C, Jayasekera S, Kao B, Páramo M, von Grotthuss M, Ranz JM. Remodelling of a homeobox gene cluster by multiple independent gene reunions in Drosophila. Nature Communications. 6: 6509. PMID 25739651 DOI: 10.1038/ncomms7509 |
0.782 |
|
| 2014 |
Yeh SD, von Grotthuss M, Gandasetiawan KA, Jayasekera S, Xia XQ, Chan C, Jayaswal V, Ranz JM. Functional divergence of the miRNA transcriptome at the onset of Drosophila metamorphosis. Molecular Biology and Evolution. 31: 2557-72. PMID 24951729 DOI: 10.1093/Molbev/Msu195 |
0.723 |
|
| 2013 |
Yeh SD, Chan C, Ranz JM. Assessing differences in sperm competitive ability in Drosophila. Journal of Visualized Experiments : Jove. e50547. PMID 23995693 DOI: 10.3791/50547 |
0.54 |
|
| 2013 |
Ranz JM, Yeh SD, Nyberg KG, Machado CA. Transcriptome Profiling of Drosophila Interspecific Hybrids: Insights into Mechanisms of Regulatory Divergence and Hybrid Dysfunction Polyploid and Hybrid Genomics. 15-35. DOI: 10.1002/9781118552872.ch2 |
0.548 |
|
| 2012 |
Yeh SD, Do T, Abbassi M, Ranz JM. Functional relevance of the newly evolved sperm dynein intermediate chain multigene family in Drosophila melanogaster males. Communicative & Integrative Biology. 5: 462-5. PMID 23181161 DOI: 10.4161/Cib.21136 |
0.631 |
|
| 2012 |
Sahagun V, Ranz JM. Characterization of genomic regulatory domains conserved across the genus Drosophila. Genome Biology and Evolution. 4: 1054-60. PMID 23042552 DOI: 10.1093/gbe/evs089 |
0.579 |
|
| 2012 |
Díaz-Castillo C, Ranz JM. Recent progress on the identity and characterization of factors that shape gene organization during eukaryotic evolution. Fly. 6: 158-61. PMID 22722673 DOI: 10.4161/fly.20861 |
0.83 |
|
| 2012 |
Ranz JM, Parsch J. Newly evolved genes: moving from comparative genomics to functional studies in model systems. How important is genetic novelty for species adaptation and diversification? Bioessays : News and Reviews in Molecular, Cellular and Developmental Biology. 34: 477-83. PMID 22461005 DOI: 10.1002/Bies.201100177 |
0.54 |
|
| 2012 |
Díaz-Castillo C, Ranz JM. Nuclear chromosome dynamics in the Drosophila male germ line contribute to the nonrandom genomic distribution of retrogenes. Molecular Biology and Evolution. 29: 2105-8. PMID 22427708 DOI: 10.1093/molbev/mss096 |
0.805 |
|
| 2012 |
Díaz-Castillo C, Xia XQ, Ranz JM. Evaluation of the role of functional constraints on the integrity of an ultraconserved region in the genus Drosophila. Plos Genetics. 8: e1002475. PMID 22319453 DOI: 10.1371/journal.pgen.1002475 |
0.818 |
|
| 2012 |
Yeh SD, Do T, Chan C, Cordova A, Carranza F, Yamamoto EA, Abbassi M, Gandasetiawan KA, Librado P, Damia E, Dimitri P, Rozas J, Hartl DL, Roote J, Ranz JM. Functional evidence that a recently evolved Drosophila sperm-specific gene boosts sperm competition. Proceedings of the National Academy of Sciences of the United States of America. 109: 2043-8. PMID 22308475 DOI: 10.1073/Pnas.1121327109 |
0.713 |
|
| 2012 |
Ranz JM, Díaz-Castillo C, Petersen R. Conserved gene order at the nuclear periphery in Drosophila. Molecular Biology and Evolution. 29: 13-6. PMID 21771720 DOI: 10.1093/molbev/msr178 |
0.817 |
|
| 2012 |
Diaz-castillo C, Xia X, Ranz JM. Two-way hierarchical clustering of the average levels of expression estimated for the 1% transcripts exhibiting the lowest P values across the six strains under study according to one-way ANOVA. Plos Genetics. DOI: 10.1371/Journal.Pgen.1002475.G004 |
0.721 |
|
| 2010 |
von Grotthuss M, Ashburner M, Ranz JM. Fragile regions and not functional constraints predominate in shaping gene organization in the genus Drosophila. Genome Research. 20: 1084-96. PMID 20601587 DOI: 10.1101/gr.103713.109 |
0.827 |
|
| 2007 |
Landry CR, Hartl DL, Ranz JM. Genome clashes in hybrids: insights from gene expression. Heredity. 99: 483-93. PMID 17687247 DOI: 10.1038/Sj.Hdy.6801045 |
0.748 |
|
| 2007 |
Ranz JM, Maurin D, Chan YS, von Grotthuss M, Hillier LW, Roote J, Ashburner M, Bergman CM. Principles of genome evolution in the Drosophila melanogaster species group. Plos Biology. 5: e152. PMID 17550304 DOI: 10.1371/journal.pbio.0050152 |
0.789 |
|
| 2006 |
Ranz JM, Machado CA. Uncovering evolutionary patterns of gene expression using microarrays. Trends in Ecology & Evolution. 21: 29-37. PMID 16701467 DOI: 10.1016/j.tree.2005.09.002 |
0.533 |
|
| 2005 |
Landry CR, Wittkopp PJ, Taubes CH, Ranz JM, Clark AG, Hartl DL. Compensatory cis-trans evolution and the dysregulation of gene expression in interspecific hybrids of Drosophila. Genetics. 171: 1813-22. PMID 16143608 DOI: 10.1534/Genetics.105.047449 |
0.743 |
|
| 2004 |
Ranz JM, Namgyal K, Gibson G, Hartl DL. Anomalies in the expression profile of interspecific hybrids of Drosophila melanogaster and Drosophila simulans. Genome Research. 14: 373-9. PMID 14962989 DOI: 10.1101/Gr.2019804 |
0.648 |
|
| 2003 |
Negre B, Ranz JM, Casals F, Cáceres M, Ruiz A. A new split of the Hox gene complex in Drosophila: relocation and evolution of the gene labial. Molecular Biology and Evolution. 20: 2042-54. PMID 12949134 DOI: 10.1093/Molbev/Msg238 |
0.804 |
|
| 2003 |
Meiklejohn CD, Parsch J, Ranz JM, Hartl DL. Rapid evolution of male-biased gene expression in Drosophila. Proceedings of the National Academy of Sciences of the United States of America. 100: 9894-9. PMID 12907700 DOI: 10.1073/Pnas.1630690100 |
0.808 |
|
| 2003 |
Ranz JM, González J, Casals F, Ruiz A. Low occurrence of gene transposition events during the evolution of the genus Drosophila. Evolution; International Journal of Organic Evolution. 57: 1325-35. PMID 12894940 DOI: 10.1111/J.0014-3820.2003.Tb00340.X |
0.734 |
|
| 2003 |
Ranz JM, Ponce AR, Hartl DL, Nurminsky D. Origin and evolution of a new gene expressed in the Drosophila sperm axoneme. Genetica. 118: 233-44. PMID 12868612 DOI: 10.1023/A:1024186516554 |
0.783 |
|
| 2003 |
Ranz JM, Castillo-Davis CI, Meiklejohn CD, Hartl DL. Sex-dependent gene expression and evolution of the Drosophila transcriptome. Science (New York, N.Y.). 300: 1742-5. PMID 12805547 DOI: 10.1126/Science.1085881 |
0.781 |
|
| 2002 |
González J, Ranz JM, Ruiz A. Chromosomal elements evolve at different rates in the Drosophila genome. Genetics. 161: 1137-54. PMID 12136017 |
0.61 |
|
| 2001 |
Ranz JM, Casals F, Ruiz A. How malleable is the eukaryotic genome? Extreme rate of chromosomal rearrangement in the genus Drosophila. Genome Research. 11: 230-9. PMID 11157786 DOI: 10.1101/Gr.162901 |
0.684 |
|
| 1999 |
Cáceres M, Ranz JM, Barbadilla A, Long M, Ruiz A. Generation of a widespread Drosophila inversion by a transposable element. Science (New York, N.Y.). 285: 415-8. PMID 10411506 DOI: 10.1126/Science.285.5426.415 |
0.756 |
|
| 1999 |
Ranz JM, Cáceres M, Ruiz A. Comparative mapping of cosmids and gene clones from a 1.6 Mb chromosomal region of Drosophila melanogaster in three species of the distantly related subgenus Drosophila. Chromosoma. 108: 32-43. PMID 10199954 DOI: 10.1007/s004120050349 |
0.655 |
|
| 1997 |
Ranz JM, Segarra C, Ruiz A. Chromosomal homology and molecular organization of Muller's elements D and E in the Drosophila repleta species group. Genetics. 145: 281-95. PMID 9071584 |
0.635 |
|
| 1997 |
Ruiz A, Ranz JM, Cáceres M, Segarra C. Chromosomal evolution and comparative gene mapping in the Drosophila repleta species group Brazilian Journal of Genetics. 20: 553-565. DOI: 10.1590/S0100-84551997000400003 |
0.674 |
|
| 1997 |
Ruiz A, Ranz JM, Cáceres M, Segarra C, Navarro A, Barbadilla A. Chromosomal evolution and comparative gene mapping in the Drosophila repleta species group Brazilian Journal of Genetics. 20: 553-565. |
0.397 |
|
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