Soumya Raychaudhuri, Ph.D.
Affiliations: | Harvard University, Cambridge, MA, United States |
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"Soumya Raychaudhuri"Parents
Sign in to add mentor| Russ Altman | grad student | 2002 | Stanford | |
| (Using text to enhance the interpretation of large multi-dimensional data sets.) | ||||
| Mark J. Daly | post-doc | Broad Institute (Evolution Tree) | ||
Children
Sign in to add trainee| Hyun Kim | research assistant | Brigham & Women's Hospital, Harvard Medical School | |
| Nikola Teslovich | research assistant | Brigham & Women's Hospital, Harvard Medical School | |
| Tiffany Amariuta | grad student | Harvard | |
| Aaron Deutsch | grad student | Harvard Medical School | |
| Chamith Fonseka | grad student | Harvard | |
| Xinli Hu | grad student | Harvard University, Medical School | |
| Kamil Slowikowski | grad student | 2013- | Harvard |
| Gosia Trynka | post-doc | Brigham & Women's Hospital, Harvard Medical School | |
| Harm-Jan Westra | post-doc | Brigham & Women's Hospital, Harvard Medical School | |
| Fan Zhang | post-doc | Brigham & Women's Hospital, Harvard Medical School | |
| Emma Davenport | post-doc | 2018 | Brigham & Women's Hospital, Harvard Medical School |
| Yang Luo | research scientist | Brigham & Women's Hospital, Harvard Medical School |
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Publications
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| Rumker L, Sakaue S, Reshef Y, et al. (2024) Identifying genetic variants that influence the abundance of cell states in single-cell data. Nature Genetics |
| Krishna C, Chiou J, Sakaue S, et al. (2024) The influence of HLA genetic variation on plasma protein expression. Nature Communications. 15: 6469 |
| Nieto-Caballero VE, Reijneveld JF, Ruvalcaba A, et al. (2024) History of tuberculosis disease is associated with genetic regulatory variation in Peruvians. Plos Genetics. 20: e1011313 |
| Dunlap G, Wagner A, Meednu N, et al. (2024) Clonal associations between lymphocyte subsets and functional states in rheumatoid arthritis synovium. Nature Communications. 15: 4991 |
| Donado CA, Jonsson AH, Theisen E, et al. (2024) Granzyme K drives a newly-intentified pathway of complement activation. Biorxiv : the Preprint Server For Biology |
| Weinand K, Sakaue S, Nathan A, et al. (2024) The chromatin landscape of pathogenic transcriptional cell states in rheumatoid arthritis. Nature Communications. 15: 4650 |
| Sakaue S, Weinand K, Isaac S, et al. (2024) Tissue-specific enhancer-gene maps from multimodal single-cell data identify causal disease alleles. Nature Genetics |
| Kronzer VL, Sparks JA, Raychaudhuri S, et al. (2024) Low-frequency and rare genetic variants associated with rheumatoid arthritis risk. Nature Reviews. Rheumatology |
| Kim T, Martínez-Bonet M, Wang Q, et al. (2024) Non-coding autoimmune risk variant defines role for ICOS in T peripheral helper cell development. Nature Communications. 15: 2150 |
| Lagattuta KA, Park HL, Rumker L, et al. (2024) The genetic basis of autoimmunity seen through the lens of T cell functional traits. Nature Communications. 15: 1204 |