Vijay Ramani
Affiliations: | University of California, San Francisco, San Francisco, CA |
Area:
molecular biology, genetics, genomics, biochemistryGoogle:
"Vijay Ramani"
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Publications
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| Carroll PA, Freie BW, Cheng PF, et al. (2021) The glucose-sensing transcription factor MLX balances metabolism and stress to suppress apoptosis and maintain spermatogenesis. Plos Biology. 19: e3001085 |
| Bonora G, Ramani V, Singh R, et al. (2021) Single-cell landscape of nuclear configuration and gene expression during stem cell differentiation and X inactivation. Genome Biology. 22: 279 |
| Singh R, Demetci P, Bonora G, et al. (2020) Unsupervised manifold alignment for single-cell multi-omics data. Acm-Bcb ... ... : the ... Acm Conference On Bioinformatics, Computational Biology and Biomedicine. Acm Conference On Bioinformatics, Computational Biology and Biomedicine. 2020: 1-10 |
| Kim HJ, Yardımcı GG, Bonora G, et al. (2020) Capturing cell type-specific chromatin compartment patterns by applying topic modeling to single-cell Hi-C data. Plos Computational Biology. 16: e1008173 |
| Srivatsan SR, McFaline-Figueroa JL, Ramani V, et al. (2019) Massively multiplex chemical transcriptomics at single cell resolution. Science (New York, N.Y.) |
| Ramani V, Deng X, Qiu R, et al. (2019) Sci-Hi-C: a single-cell Hi-C method for mapping 3D genome organization in large number of single cells. Methods (San Diego, Calif.) |
| Bertero A, Fields PA, Ramani V, et al. (2019) Dynamics of genome reorganization during human cardiogenesis reveal an RBM20-dependent splicing factory. Nature Communications. 10: 1538 |
| Ramani V, Qiu R, Shendure J. (2019) High Sensitivity Profiling of Chromatin Structure by MNase-SSP. Cell Reports. 26: 2465-2476.e4 |
| Cao J, Cusanovich DA, Ramani V, et al. (2018) Joint profiling of chromatin accessibility and gene expression in thousands of single cells. Science (New York, N.Y.) |
| Bonora G, Deng X, Fang H, et al. (2018) Orientation-dependent Dxz4 contacts shape the 3D structure of the inactive X chromosome. Nature Communications. 9: 1445 |