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Alex Zelikovsky

Affiliations: 
Georgia State University, Atlanta, GA, United States 
Area:
Computer Science, Bioinformatics, Epidemiology
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"Alex Zelikovsky"
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Jingwu He grad student 2006 Georgia State
Nisar Hundewale grad student 2006 Georgia State
Weidong Mao grad student 2006 Georgia State
Dumitru Brinza grad student 2007 Georgia State
Qiong Cheng grad student 2009 Georgia State
Stefan Gremalschi grad student 2009 Georgia State
Serghei Mangul grad student 2012 Georgia State
Bassam Tork grad student 2013 Georgia State

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Publications

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Knyazev S, Chhugani K, Sarwal V, et al. (2022) Unlocking capacities of genomics for the COVID-19 response and future pandemics. Nature Methods. 19: 374-380
Alser M, Rotman J, Deshpande D, et al. (2021) Technology dictates algorithms: recent developments in read alignment. Genome Biology. 22: 249
Knyazev S, Tsyvina V, Shankar A, et al. (2021) Accurate assembly of minority viral haplotypes from next-generation sequencing through efficient noise reduction. Nucleic Acids Research
Knyazev S, Chhugani K, Ayyala R, et al. (2021) Unlocking capacities of viral genomics for the COVID-19 pandemic response. Arxiv
Mandric I, Rotman J, Yang HT, et al. (2020) Author Correction: Profiling immunoglobulin repertoires across multiple human tissues using RNA sequencing. Nature Communications. 11: 4499
Knyazev S, Hughes L, Skums P, et al. (2020) Epidemiological data analysis of viral quasispecies in the next-generation sequencing era. Briefings in Bioinformatics
Mandric I, Rotman J, Yang HT, et al. (2020) Profiling immunoglobulin repertoires across multiple human tissues using RNA sequencing. Nature Communications. 11: 3126
Mitchell K, Brito JJ, Mandric I, et al. (2020) Benchmarking of computational error-correction methods for next-generation sequencing data. Genome Biology. 21: 71
Lähnemann D, Köster J, Szczurek E, et al. (2020) Eleven grand challenges in single-cell data science. Genome Biology. 21: 31
Brito JJ, Mosqueiro T, Rotman J, et al. (2020) Telescope: an interactive tool for managing large-scale analysis from mobile devices. Gigascience. 9
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