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Craig J. Benham

Affiliations: 
Applied Mathematics University of California, Davis, Davis, CA 
Area:
Bioinformatics Biology, General Biophysics
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"Craig Benham"
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Children

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Cheryl L. Sershen grad student 2009 UC Davis
Eva M. Strawbridge grad student 2009 UC Davis
Adam T. Dobrin grad student 2013 UC Davis

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Publications

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Benham CJ. (2023) DNA superhelicity. Nucleic Acids Research
Shaheen C, Hastie C, Metera K, et al. (2022) Non-equilibrium structural dynamics of supercoiled DNA plasmids exhibits asymmetrical relaxation. Nucleic Acids Research
Chedin F, Benham CJ. (2020) Emerging roles for R-loop structures in the management of topological stress. The Journal of Biological Chemistry
Scott S, Shaheen C, McGuinness B, et al. (2019) Single-molecule visualization of the effects of ionic strength and crowding on structure-mediated interactions in supercoiled DNA molecules. Nucleic Acids Research
Stolz R, Sulthana S, Hartono SR, et al. (2019) Interplay between DNA sequence and negative superhelicity drives R-loop structures. Proceedings of the National Academy of Sciences of the United States of America
Stabile F, Shaheen C, Scott S, et al. (2019) Single Molecule Imaging of DNA Structure: CLIC Microscopy Powers Mechanistic Insights for Drug Development Biophysical Journal. 116: 475a
Scott S, Xu ZM, Kouzine F, et al. (2018) Visualizing structure-mediated interactions in supercoiled DNA molecules. Nucleic Acids Research
Kouzine F, Wojtowicz D, Baranello L, et al. (2017) Permanganate/S1 Nuclease Footprinting Reveals Non-B DNA Structures with Regulatory Potential across a Mammalian Genome. Cell Systems
Scott S, Ming Xu Z, Kouzine F, et al. (2017) Single Molecule Visualization of Topology-Mediated Interactions in Supercoiled DNA Biophysical Journal. 112: 474a
Sutthibutpong T, Matek C, Benham C, et al. (2016) Long-range correlations in the mechanics of small DNA circles under topological stress revealed by multi-scale simulation. Nucleic Acids Research
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