Rafael A. Irizarry
Affiliations: | Johns Hopkins University, Baltimore, MD |
Area:
Biostatistics BiologyGoogle:
"Rafael Irizarry"Children
Sign in to add trainee| Aristide Achy-Brou | grad student | 2008 | Johns Hopkins |
| Benilton d. Carvalho | grad student | 2009 | Johns Hopkins |
| Matthew N. McCall | grad student | 2010 | Johns Hopkins |
| Eitan Halper-Stromberg | grad student | 2013 | Johns Hopkins |
| Rumen Kostadinov | post-doc | 2012-2014 | Johns Hopkins Bloomberg School of Public Health (Computational Biology Tree) |
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Publications
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| Johnstone SE, Reyes A, Qi Y, et al. (2020) Large-Scale Topological Changes Restrain Malignant Progression in Colorectal Cancer. Cell |
| Townes FW, Irizarry RA. (2020) Quantile normalization of single-cell RNA-seq read counts without unique molecular identifiers. Genome Biology. 21: 160 |
| Nuzzo PV, Berchuck JE, Spisak S, et al. (2020) Sensitive detection of renal cell carcinoma using plasma and urine cell-free DNA methylomes. Journal of Clinical Oncology. 38: 728-728 |
| Townes FW, Hicks SC, Aryee MJ, et al. (2019) Feature selection and dimension reduction for single-cell RNA-Seq based on a multinomial model. Genome Biology. 20: 295 |
| Hicks SC, Irizarry RA. (2019) methylCC: technology-independent estimation of cell type composition using differentially methylated regions. Genome Biology. 20: 261 |
| McCorkindale AL, Wahle P, Werner S, et al. (2019) A gene expression atlas of embryonic neurogenesis in reveals complex spatiotemporal regulation of lncRNAs. Development (Cambridge, England). 146 |
| Benjamini Y, Taylor J, Irizarry RA. (2018) Selection-Corrected Statistical Inference for Region Detection With High-Throughput Assays. Journal of the American Statistical Association. 114: 1351-1365 |
| Korthauer K, Chakraborty S, Benjamini Y, et al. (2018) Detection and accurate false discovery rate control of differentially methylated regions from whole genome bisulfite sequencing. Biostatistics (Oxford, England) |
| Hicks SC, Townes FW, Teng M, et al. (2017) Missing data and technical variability in single-cell RNA-sequencing experiments. Biostatistics (Oxford, England) |
| Hicks SC, Okrah K, Paulson JN, et al. (2017) Smooth quantile normalization. Biostatistics (Oxford, England) |