Bruce H. Rannala, PhD
Affiliations: | University of California, Davis, Davis, CA |
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"Bruce Rannala"Cross-listing: Evolution Tree - Computational Biology Tree
Parents
Sign in to add mentor| John A. Hartigan | grad student | 1995 | Yale |
| Günter Paul Wagner | grad student | 1995 | Yale (Evolution Tree) |
| Montgomery Slatkin | post-doc | 1998 | UC Berkeley (Evolution Tree) |
Children
Sign in to add trainee| Karen A. Cranston | grad student | 2001-2007 | University of Alberta (Evolution Tree) |
| Jiansi Gao | grad student | 2022 | UC Davis (Evolution Tree) |
| Sneha Chakraborty | grad student | 2023 | UC Davis (Evolution Tree) |
| Anna Nagel | grad student | 2023 | UC Davis (Evolution Tree) |
| Michael R. May | post-doc | UC Davis (Evolution Tree) |
BETA: Related publications
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Publications
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| Rannala B, Yang Z. (2025) Reading tree leaves: inferring speciation anfd extinction processes using phylogenies. Philosophical Transactions of the Royal Society of London. Series B, Biological Sciences. 380: 20230309 |
| May MR, Rannala B. (2024) Early detection of highly transmissible viral variants using phylogenomics. Science Advances. 10: eadk7623 |
| Nagel AA, Flouri T, Yang Z, et al. (2024) Bayesian Inference Under the Multispecies Coalescent with Ancient DNA Sequences. Systematic Biology |
| Flouri T, Jiao X, Huang J, et al. (2023) Efficient Bayesian inference under the multispecies coalescent with migration. Proceedings of the National Academy of Sciences of the United States of America. 120: e2310708120 |
| May MR, Rannala B. (2023) Phylogenies increase power to detect highly transmissible viral genome variants. Medrxiv : the Preprint Server For Health Sciences |
| Nagel AA, Rannala B. (2023) Bayesian phylogenetic inference of HIV latent lineage ages using serial sequences. Journal of the Royal Society, Interface. 20: 20230022 |
| Tiley GP, Flouri T, Jiao X, et al. (2023) Estimation of species divergence times in presence of cross-species gene flow. Systematic Biology |
| Gao J, May MR, Rannala B, et al. (2023) Model misspecification misleads inference of the spatial dynamics of disease outbreaks. Proceedings of the National Academy of Sciences of the United States of America. 120: e2213913120 |
| Chakraborty S, Rannala B. (2023) An Efficient Exact Algorithm for Identifying Hybrids Using Population Genomic Sequences. Genetics |
| Gao J, May MR, Rannala B, et al. (2023) PrioriTree: a utility for improving phylodynamic analyses in BEAST. Bioinformatics (Oxford, England). 39 |