David B. Dahl, Ph.D.
Affiliations: | 2004 | University of Wisconsin, Madison, Madison, WI |
Area:
Statistics, Biostatistics Biology, GeneticsGoogle:
"David Dahl"Parents
Sign in to add mentor| Michael Newton | grad student | 2004 | UW Madison | |
| (Conjugate Dirichlet process mixture models: Efficient sampling, gene expression, and clustering.) | ||||
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Publications
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| Li Q, Dahl DB, Vannucci M, et al. (2016) KScons: A Bayesian Approach for Protein Residue Contact Prediction using the Knob-Socket Model of Protein Tertiary Structure. Bioinformatics (Oxford, England) |
| Li Q, Dahl DB, Vannucci M, et al. (2014) Bayesian model of protein primary sequence for secondary structure prediction. Plos One. 9: e109832 |
| Day R, Joo H, Chavan AC, et al. (2013) Understanding the general packing rearrangements required for successful template based modeling of protein structure from a CASP experiment. Computational Biology and Chemistry. 42: 40-8 |
| Joo H, Chavan AG, Day R, et al. (2011) Near-native protein loop sampling using nonparametric density estimation accommodating sparcity. Plos Computational Biology. 7: e1002234 |
| Day R, Lennox KP, Dahl DB, et al. (2010) Characterizing the regularity of tetrahedral packing motifs in protein tertiary structure. Bioinformatics (Oxford, England). 26: 3059-66 |
| Lennox KP, Dahl DB, Vannucci M, et al. (2010) A DIRICHLET PROCESS MIXTURE OF HIDDEN MARKOV MODELS FOR PROTEIN STRUCTURE PREDICTION. The Annals of Applied Statistics. 4: 916-942 |
| Kim S, Dahl DB, Vannucci M. (2009) Spiked Dirichlet Process Prior for Bayesian Multiple Hypothesis Testing in Random Effects Models. Bayesian Analysis (Online). 4: 707-732 |
| Lennox KP, Dahl DB, Vannucci M, et al. (2009) Density Estimation for Protein Conformation Angles Using a Bivariate von Mises Distribution and Bayesian Nonparametrics. Journal of the American Statistical Association. 104: 586-596 |
| Dahl DB, Bohannan Z, Mo Q, et al. (2008) Assessing side-chain perturbations of the protein backbone: a knowledge-based classification of residue Ramachandran space. Journal of Molecular Biology. 378: 749-58 |
| Dahl DB, Mo Q, Vannucci M. (2008) Simultaneous inference for multiple testing and clustering via a Dirichlet process mixture model Statistical Modelling. 8: 23-39 |