Ahmet Ay, Ph.D.
Affiliations: | 2009 | Michigan State University, East Lansing, MI |
Area:
Applied Mathematics, Molecular Biology, Bioinformatics BiologyGoogle:
"Ahmet Ay"Parents
Sign in to add mentor| ChiChia Chiu | grad student | 2009 | Michigan State | |
| (Deciphering cis-regulatory transcriptional grammar in Drosophila melanogaster by mathematical models.) | ||||
| David Arnosti | grad student | 2006-2010 | Colgate University (FlyTree) | |
| (computational biologist) | ||||
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Publications
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| Zinani OQH, Keseroğlu K, Dey S, et al. (2022) Gene copy number and negative feedback differentially regulate transcriptional variability of segmentation clock genes. Iscience. 25: 104579 |
| Zinani OQH, Keseroğlu K, Ay A, et al. (2020) Pairing of segmentation clock genes drives robust pattern formation. Nature |
| Ren Y, Ay A, Dobra A, et al. (2019) Characterizing building blocks of resource constrained biological networks. Bmc Bioinformatics. 20: 318 |
| Keskin S, Simsek MF, Vu HT, et al. (2019) Regulatory Network of the Scoliosis-Associated Genes Establishes Rostrocaudal Patterning of Somites in Zebrafish. Iscience. 12: 247-259 |
| Ren Y, Ay A, Gerke TA, et al. (2018) Identification of jointly correlated gene sets. Journal of Bioinformatics and Computational Biology. 16: 1840019 |
| Keskin S, Devakanmalai GS, Kwon SB, et al. (2018) Noise in the Vertebrate Segmentation Clock Is Boosted by Time Delays but Tamed by Notch Signaling. Cell Reports. 23: 2175-2185.e4 |
| Liberman AR, Halitjaha L, Ay A, et al. (2018) Modeling Strengthens Molecular Link between Circadian Polymorphisms and Major Mood Disorders. Journal of Biological Rhythms. 748730418764540 |
| Yildirim N, Aktas ME, Ozcan SN, et al. (2016) Differential transcriptional regulation by alternatively designed mechanisms: A mathematical modeling approach. In Silico Biology |
| Ren Y, Wang Q, Hasan MM, et al. (2016) Identifying the topology of signaling networks from partial RNAi data. Bmc Systems Biology. 10: 53 |
| Belanger KD, Larson N, Kahn J, et al. (2016) Mutant Screen Report: Microarray Analysis of Gene Expression in S. cerevisiae kap108Δ Mutants Upon Addition of Oxidative Stress. G3 (Bethesda, Md.) |