Ritambhara Singh
Affiliations: | Department of Computer Science | University of Virginia Charlottesville |
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"Ritambhara Singh"Parents
Sign in to add mentor| Yanjun Qi | grad student | University of Virginia Charlottesville | |
| William Stafford Noble | post-doc | University of Washington (Neurotree) |
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Publications
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| Zhang J, Singh R. (2023) Investigating the Complexity of Gene Co-expression Estimation for Single-cell Data. Biorxiv : the Preprint Server For Biology |
| Berger B, Tian D, Li WV, et al. (2022) What are the keys to succeeding as a computational biologist in today's research climate? Cell Systems. 13: 781-785 |
| Demetci P, Santorella R, Chakravarthy M, et al. (2022) SCOTv2: Single-Cell Multiomic Alignment with Disproportionate Cell-Type Representation. Journal of Computational Biology : a Journal of Computational Molecular Cell Biology |
| Bigness J, Loinaz X, Patel S, et al. (2022) Integrating Long-Range Regulatory Interactions to Predict Gene Expression Using Graph Convolutional Networks. Journal of Computational Biology : a Journal of Computational Molecular Cell Biology |
| Demetci P, Santorella R, Sandstede B, et al. (2022) SCOT: Single-Cell Multi-Omics Alignment with Optimal Transport. Journal of Computational Biology : a Journal of Computational Molecular Cell Biology. 29: 3-18 |
| Demetci P, Santorella R, Sandstede B, et al. (2022) Single-Cell Multiomics Integration by SCOT. Journal of Computational Biology : a Journal of Computational Molecular Cell Biology |
| Bonora G, Ramani V, Singh R, et al. (2021) Single-cell landscape of nuclear configuration and gene expression during stem cell differentiation and X inactivation. Genome Biology. 22: 279 |
| Conard AM, Goodman N, Hu Y, et al. (2021) TIMEOR: a web-based tool to uncover temporal regulatory mechanisms from multi-omics data. Nucleic Acids Research |
| Singh R, Demetci P, Bonora G, et al. (2020) Unsupervised manifold alignment for single-cell multi-omics data. Acm-Bcb ... ... : the ... Acm Conference On Bioinformatics, Computational Biology and Biomedicine. Acm Conference On Bioinformatics, Computational Biology and Biomedicine. 2020: 1-10 |
| Blakely D, Collins E, Singh R, et al. (2020) FastSK: fast sequence analysis with gapped string kernels. Bioinformatics (Oxford, England). 36: i857-i865 |